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Detailed information on CNT30141425


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84PD8|SAP11_ORYSJ, E-value = 2e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30468767Lolium perenneSaccharum spontaneum21.4311.8689.9198forward

Expression of CNT30141425

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MKQFWQRLLVAGLAGKPQLLAQSAMSGACRCTSVGSSTLLSRCAMTPVPTAGAE

>peptide 2 (57 aa)
MGQHHTPTLSSSSPPPRAGSQPPLQQPQGYHRTVLSFVAPAPITIFHLFSPFRFHSR*

>peptide 3 (32 aa)
MSSLSFDLQNLTILAARTTGFSLAMASLAADL*

Sequence

>CNT30141425
ACTGCAGAGAAATGACACCACCCAAGCGATCGATTGATGATAATTTATACAAATATATAGGGAAATTGAATTTTTAAATAGAGAGATCATGGGACAACAC
CACACACCCACCCTATCTTCCTCATCTCCTCCGCCGCGAGCCGGCAGCCAACCACCACTACAACAACCACAAGGTTATCATCGCACTGTTTTGTCCTTCG
TCGCGCCCGCCCCTATCACCATCTTCCACCTTTTCTCTCCTTTCCGTTTTCATTCACGGTAACACCTAGGTGGCTCGCCTTTAATTTTCCAAAGGAAGGA
AAGAAAGAGGAAAAAAGAGTGGATTTTTCTTGAGATTTCTTCTCCGTGTGTGTGTATATCATCATGTCCTCCTTGTCCTTTGATCTTCAGAACCTAACGA
TCTTGGCCGCGCGCACGACGGGGTTCTCCTTGGCGATGGCGTCCCTGGCGGCGGACTTGTAGTCGAAGCTGCAGTCGTGGCGGTCCGAGTAGCGGTGGGA
GCCGCAGAACATCTCGCCGCAGCGGCAGCGGAAGCCCGTGAGGCCGACGCGCTTCCGGCAGCTGTGGCAGCGGTTGACCGACGACGACCTGGACGCCTTC
GGGTCGGCGGGGCCGGCGGCCGGCCGGTCGACGGCCACGTACACGGGCTGCGCCGATGCGGCGGGCGCCCTAGGCTTGTCGAAGAGGGTCGGGAACGGCG
CCGGCTGCGAGGAGGAGGATGACGGGGACGGCGGGGACGTGGAGGAGGTGGATGAGGCGGCGATGAAGCAGTTCTGGCAGAGGTTGTTGGTGGCGGGGTT
GGCCGGGAAGCCGCAGCTGTTGGCGCAGAGCGCGATGTCCGGCGCGTGCAGGTGCACCTCCGTCGGCTCCTCCACCTTGTTGTCCCGCTGCGCCATGACG
CCTGTACCAACTGCAGGAGCTGAG