Detailed information on CNT301414


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678071Zea maysSetaria viridis22.728.6888.24102forward
CNT30521811Zea maysSetaria italica26.9517.5488.43121forward
CNT30307554Zea maysTriticum aestivum42.0934.4388.89189forward

Expression of CNT301414

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MAAAEVAMGGRERESRSVGDGEPEALHWWRRRRRRRALRALVAAESNDR

>peptide 2 (92 aa)
DDFVSERPERGGEGERAGGDGGCEAKERPRTDGERAEDEPRDGGEEDGEELPGLWGYLGRPRHEEADGEADAEARSGGRWRRGIGERERGLG*

>peptide 3 (84 aa)
QMTSLVNAPNAAVKGSVRVATVAVRPRNAHAPTGSGPRTSPAMVERKMERSCQASGVTSAGRGTRKRTARPMRRRGAGAGGGEG*

Sequence

>CNT301414
CAGATGACTTCGTTAGTGAACGCCCCGAACGCGGCGGTGAAGGGGAGCGTGCGGGTGGCGACGGTGGCTGTGAGGCCAAGGAACGCCCACGCACCGACGG
GGAGCGGGCCGAGGACGAGCCCCGCGATGGTGGAGAGGAAGATGGAGAGGAGCTGCCAGGCCTCTGGGGTTACCTCGGCCGGCCGCGGCACGAGGAAGCG
GACGGCGAGGCCGATGCGGAGGCGAGGAGCGGGGGCAGGTGGCGGCGAGGGATAGGTGAGAGGGAGAGGGGATTGGGGTAAGAGTGGAGGTGGAGGTGCA
GATGGCGGCGGCGGAGGTGGCTATGGGAGGTCGGGAGAGGGAGAGCCGGTCGGTGGGTGACGGCGAGCCGGAGGCTCTCCATTGGTGGCGGCGGCGGCGG
CGGCGGCGAGCGCTACGGGCACTGGTGGCGGCGGAGAGCAACGACAGGT