Detailed information on CNT30141394


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 5e-84

BLAST vs NONCODE:
NONORUT005433, E-value = 4e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700039Lolium perenneQuercus lobata51.7967.8981.63332forward
CNT30267640Lolium perenneChenopodium quinoa47.5842.0181.31305forward
CNT30380641Lolium perenneManihot esculenta40.5637.6378.85260forward
CNT30200358Lolium perennePisum sativum56.0157.7283.29359forward
CNT30709007Lolium perenneGlycine max30.8983.1983.84198forward
CNT3048083Lolium perennePrunus dulcis63.4957.9881.82407forward
CNT30565750Lolium perenneActinidia chinensis56.0132.6783.57359forward
CNT3084175Lolium perenneVigna radiata55.0733.8880.45353forward
CNT30441386Lolium perenneAegilops tauschii40.8754.5896.95262forward
CNT30240007Lolium perenneAvena sativa56.0163.9993.59359forward
CNT30309861Lolium perenneCamelina sativa26.5227.4279.41170forward
CNT30259840Lolium perenneBrassica rapa31.8370.5986.27204forward
CNT30613891Lolium perenneArabis alpina18.2529.0382.05117forward
CNT30368649Lolium perenneSorghum bicolor38.5358.8195.14247forward
CNT30622400Lolium perenneCajanus cajan63.0344.1587.62404forward
CNT30358910Lolium perenneLactuca sativa45.7142.5378.5293forward
CNT30154413Lolium perennePrunus persica16.2226.8788.46104forward
CNT30644610Lolium perenneCannabis sativa27.4638.2680.68176forward
CNT30329187Lolium perenneDioscorea rotundata15.4425.5284.8599forward
CNT3051266Lolium perenneCucumis sativus28.3924.2780.77182forward
CNT30114434Lolium perenneEutrema salsugineum12.4820.19080forward
CNT3018856Lolium perenneCyanidioschyzon merolae31.286.9682200forward

Expression of CNT30141394

Peptides detected in this lncRNA

>peptide 1 (51 aa)
EDRFRTTLHFHFISASGLHRTGATKRTDGKSYQQHKQNQDPYNRIKPATNS*

>peptide 2 (31 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSNSPTR*

>peptide 3 (79 aa)
MSSSVLFWYLRISRSATVPGRKRCGFFTPPVAGADLRAALVASCFLGALPPVDLRAVCFVRAIGRRGDEARSLVGGLGFG

>peptide 4 (59 aa)
KTDLGQHCISISFQHLAYIGQEPRREQTVNHINNTNRTKIPTTGSNQPRTASYSRRPRA*

Sequence

>CNT30141394
GAAGACAGATTTAGGACAACACTGCATTTCCATTTCATTTCAGCATCTGGCTTACATAGGACAGGAGCCACGAAGAGAACAGACGGTAAATCATATCAAC
AACACAAACAGAACCAAGATCCCTACAACCGGATCAAACCAGCCACGAACAGCTAGCTACAGCCGGCGGCCCCGAGCCTAGGCCCTCTCGCCCCTGATGC
GTCGCGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCAAACAGCCCCACGAGGTAGGCCTCGGC
GGCCTCCTGCAGCGCGGAGACCGCGGAGCTCTGGAAGCGGAGGTCCGTCTTGAAGTCCTGCGCGATCTCGCGCACGAGGCGCTGGAAGGGCAGCTTGCGG
ATGAGCAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCGCGCAGCGCGACGGTGCCGGGGCGGAAGCGGTGCGGCTTCTTCACGCCGCCGGTCGCCGGGG
CGGACTTGCGCGCCGCCTTGGTCGCCAGCTGCTTCCTCGGGGCCTTGCCGCCGGTGGACTTGCGCGCCGTCTGCTTCGTGCGGGCCATCGGGCGTAGAGG
GGATGAGGCTCGGAGTTTGGTTGGTGGCTTGGGATTTGGGT