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Detailed information on CNT30141380


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 8e-101

BLAST vs NONCODE:
NONMTRT002043, E-value = 3e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690921Lolium perenneOryza sativa50.1628.992.47465forward
CNT30349330Lolium perenneEragrostis tef50.0529.9493.75464forward
CNT30107350Lolium perenneOryza longistaminata50.1653.8892.26465forward

Expression of CNT30141380

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLKYTTSKDESTVVSYSSHDLQNRVGYTTT

>peptide 2 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 3 (62 aa)
MVRHLLTTTEAEHQVEGGLLLDVVVRKGAAILQLLTSEDEALLVRGDALLVLDLGLHIVNGV*

>peptide 4 (66 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQSYSKVNGYLQKRSNT*

Sequence

>CNT30141380
GTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGTTTGTAGACACAAGGTGACATAACACGAGACCACAATACAAC
AGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCCAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCA
CCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGGC
GCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT
GAGGGTCTTGACGAAGATCTGCATGCCACCGCGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCC
TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGGACT
CCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACGAAGTAGACCAGAGTTACAGCAAGGTAAACGGATATCT
TCAGAAGAGAAGCAATACATGAACCAATACGCCACGATCCAATAGGGAAATCGTAACTACGAACCAACAAACACATCAATGTAAAGATGAACAGGCCACT
CGTGTAACCATGTTGATCAAACCTATAGCAGTTTTATGCTAAAATACACAACAAGCAAAGATGAATCAACAGTAGTATCATACAGCTCACATGACTTACA
GAATAGAGTTGGATACACAACTACGGA