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Detailed information on CNT30141359


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 1e-66

BLAST vs NONCODE:
NONBRAT001321, E-value = 2e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376827Lolium perenneArabidopsis thaliana15.6157.6383.82136forward
CNT30255419Lolium perenneAvena sativa39.4964.5495.35344forward
CNT30148402Lolium perenneBrachypodium distachyon17.831.5796.13155forward

Expression of CNT30141359

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAPLLPSSNLASAACGFGELDEKSRLVGRW

>peptide 2 (59 aa)
MQRREGTGDEPWWRAASWGPCRRWTCGRSAWYGPWRRSFRVRTWLLRLVDLGNWMRKVD*

Sequence

>CNT30141359
AACAGAGTTACAGGGATGAAGAACAGGAGGCTACACACAATTGCTAACTGTCGCAATATCGATAACTGTAAATAGCATTCATATGAATTCAGCGGAAACA
GAGAAGCGGTTTCTTGTAACTACGGTAAAACATCCAGATCTTTACAACGAAATAAAACCTTCCTAACACGACCTAACAAGATCTAAATCCAGAAGGGAAC
CAACTACGGAATCGCTTGCGTCGACCGCGACCGGGCATCACCGGCCTAGGCGCGCTCACCGCGGATGCGGCGGGCGAGCTGAATGTCCTTGGGCATGATG
GTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGGCCGACGAGGTAGGCCTCGGCCGCCTCCTGGAGCGCCAGCACGGCGTGGCTCT
GGAACCGCAGGTCCGTCTTGAAGTCCTGCGCGATCTCGCGGACGAGGCGCTGGAAGGGCAGCTTGCGGATGAGCAGCTCCGTGCTCTTCTGGTACTTGCG
GATCTCGCGCAGCGCCACGGTCCCGGGCCTGTAGCGGTGGGGCTTCTTCACGCCGCCGGTGGTCGGGGCCGACTTCCTCGCCGCCTGCAGCACAGATTCA
AACCAAACGTCAATCGATTTCGCAACGAACAATCACCGGCAGACGATTCAAGCAGACAACTAGGAGTACAACGGAGAGATGCAGAGACGGGAAGGGACGG
GAGACGAACCTTGGTGGCGAGCTGCTTCCTGGGGGCCTTGCCGCCGGTGGACTTGCGGGCGGTCTGCTTGGTACGGGCCATGGCGCCGCTCCTTCCGAGT
TCGAACTTGGCTTCTGCGGCTTGTGGATTTGGGGAACTGGATGAGAAAAGTCGACTAGTGGGAAGATGGTT