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Detailed information on CNT30141331

BLAST search results

BLAST vs Swiss-Prot:
sp|Q7M258|FER2_PEA, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30695212	Lolium perenne	Oryza sativa	24.6	24	83.33	168	forward
CNT30523350	Lolium perenne	Setaria italica	26.21	41.72	89.39	179	forward
CNT30192541	Lolium perenne	Secale cereale	31.77	22.33	90.32	217	forward
CNT30308049	Lolium perenne	Triticum aestivum	31.77	32.73	90.78	217	forward
CNT30400520	Lolium perenne	Triticum turgidum	31.77	29.44	89.86	217	forward
CNT30443354	Lolium perenne	Aegilops tauschii	30.16	33.5	95.63	206	forward
CNT30670383	Lolium perenne	Triticum dicoccoides	32.5	75	90.09	222	forward
CNT30684306	Lolium perenne	Triticum urartu	30.16	34.51	95.63	206	forward
CNT30366850	Lolium perenne	Sorghum bicolor	27.38	24.54	87.17	187	forward
CNT30596681	Lolium perenne	Oryza meridionalis	22.99	20.93	89.81	157	forward
CNT30370840	Lolium perenne	Oryza glumipatula	24.6	23.33	83.33	168	forward
CNT30102906	Lolium perenne	Oryza rufipogon	22.99	20.21	89.17	157	forward
CNT30117414	Lolium perenne	Oryza nivara	24.6	19.83	83.33	168	forward
CNT30551485	Lolium perenne	Oryza brachyantha	26.35	23.14	85.56	180	forward

Expression of CNT30141331

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRWEELASVCGYGGRIAELGDGGVRMAGIS

Sequence

>CNT30141331
TCTTACAAGTGAGATGCTATTTAAGAATTAAGACACCTCAAGCATCAAGATTCATTTCAGTACGTTGAGTTACGTACATGCATATACTATAGTATTTGAC
AGCAGTACTACGGGGTATATCTTACGGTACAAAAAAGGTATAGGTAATTCAACGACCATATCACCACTTGAGCAAATCATCACGCAATTCATTCAAGCAC
TAACAAATCGGTGGCGATGCCCATGTACGCATGACAAGAGAGAGATAGTGTATAAATCAGCTTAGGCGGTGAGCTCCTCCTCCTTGTGGGTCTCGATGAC
GAGGTCGGACGTGGGGTAGGCGTGGCAGGTCGATACCCTCCTCCTCGGCCTGGTCGAGGATGTAGACGTCGTCGGGGACCTCCAGCTCCACCTCCCCCTC
GGGCGTGATCAGCTTCACCTTGTAGGTGGCCTGCGCGCGGAGCCTGGCTCCCCGCACCTGCTTGGCGGCGGTGAGAGCGAGGTTGGCCGGCGCGAGGGCC
ACGCGGGGCGCCGGTGGGGCGGCGGCGCGCAGGGAGAAGGGCGCGCGGAGGCTGCTCAGTGCGGTGGCCATTGCTAGCTGCTGCTCGGGGAGATGAGATG
GGAAGAGCTAGCTAGCGTGTGTGGCTATGGAGGTCGGATAGCTGAGCTAGGGGATGGAGGAGTGAGGATGGCGGGAATAAGTA