Detailed information on CNT30141326


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001339, E-value = 1e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676994Lolium perenneSetaria viridis49.733.0792.73165forward
CNT30381505Lolium perenneManihot esculenta37.0542.2790.24123forward
CNT30403504Lolium perenneBeta vulgaris47.2971.0495.54157reverse complement
CNT30525072Lolium perennePhaseolus vulgaris35.2427.4100117reverse complement
CNT3044711Lolium perennePrunus dulcis47.2932.9196.18157reverse complement
CNT30588765Lolium perenneMusa acuminata44.2821.06100147reverse complement
CNT3087623Lolium perenneVigna radiata47.2975.4894.9157reverse complement
CNT30554009Lolium perenneOryza glaberrima50.630.8398.81168forward
CNT30266045Lolium perenneBrassica rapa46.6934.9999.35155forward
CNT30612440Lolium perenneArabis alpina45.4867.1194.04151forward
CNT30715515Lolium perenneMalus domestica golden36.1459.786.67120forward
CNT30352524Lolium perenneEragrostis tef21.3916.9598.5971reverse complement
CNT30357533Lolium perenneLactuca sativa47.2915.4296.18157forward
CNT30483432Lolium perenneChara braunii44.2872.0689.8147forward
CNT30643690Lolium perenneCannabis sativa47.2955.2893.63157forward
CNT3056240Lolium perenneAmborella trichopoda40.6647.293.33135forward
CNT30576232Lolium perenneOryza barthii49.743.3198.79165forward

Expression of CNT30141326

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MSRRLIGSGLVKGTEPTGAVAKASLHRAIVTAYGPEPG*

>peptide 2 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

Sequence

>CNT30141326
GCGTTAGCAAGATCGCTAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAA
GGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAAGTGATCTCTGACCGCGTGCCTGTTGAAGAATGAGCCG
GCGACTCATAGGCAGTGGCTTGGTTAAGGGAACGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAA
CCTGGGTGATCTATCCATGACCAGGCCCGCGT