Detailed information on CNT30141287


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 9e-174

BLAST vs NONCODE:
NONBNAT002216, E-value = 1e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696247Lolium perenneOryza sativa58.855.6886.29598forward
CNT30534258Lolium perenneEucalyptus grandis62.1456.1384.18632forward
CNT30300930Lolium perenneTriticum aestivum63.7264.6187.5648forward
CNT30555049Lolium perenneOryza glaberrima58.850.7686.45598forward
CNT30443381Lolium perenneAegilops tauschii53.8856.6191.42548forward
CNT30255339Lolium perenneAvena sativa87.8189.7589.59893forward
CNT30668255Lolium perenneTriticum dicoccoides61.5563.7591.21626forward
CNT30455809Lolium perenneSaccharum spontaneum56.3452.6287.96573forward
CNT3010541Lolium perenneZea mays44.1556.1288.86449forward
CNT30345522Lolium perenneEragrostis tef53.2954.5887.64542forward
CNT30363150Lolium perenneSorghum bicolor58.2148.9787.67592forward
CNT30596888Lolium perenneOryza meridionalis52.749.1786.75536forward
CNT30369277Lolium perenneOryza glumipatula57.2359.6987.29582forward
CNT30575045Lolium perenneOryza barthii57.9262.3987.61589forward
CNT30582453Lolium perenneEchinochloa crusgalli52.850.6689.94537forward
CNT30497363Lolium perenneDigitaria exilis65.0956.2487.01662forward
CNT30604592Lolium perenneOryza punctata61.9563.1987.46630forward
CNT30556694Lolium perennePanicum hallii51.4354.7189.48523forward

Expression of CNT30141287

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQREWITSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (35 aa)
MDQAWVAEVVEAAFAKDLGAGLEPDRLAELHAVAR*

>peptide 3 (38 aa)
MVMRPPPRTEEAPASFIAGEDRAMVAAAIAIGRNRASC*

>peptide 4 (31 aa)
IFIWKPRSCIFPYRHFVFQHRSLTIREVGLS*

>peptide 5 (43 aa)
MACTKNPNMENMARRPFLSSFTLSSANASGSSARPRGSKLPPG*

>peptide 6 (90 aa)
MYTLRNSTFKCSLTGHKVGGESPRIVVDGVGEVVGKVLKWTLTSDDGLHEESKHGEHGEAAVLELLHLKLSKCLRVVSQTKGVEAATRVE*

>peptide 7 (38 aa)
MPQGRQPDQGGRSCHQGRVSRRSLRAGHRQHGTPRWHP*

Sequence

>CNT30141287
CATATTCATATGGAAACCGAGATCTTGCATTTTTCCTTATAGACATTTCGTGTTCCAACATAGGTCCTTGACGATCAGAGAAGTAGGCCTCAGCTAAAAA
CATCTTTGATAGTGTACAAATGATCACAGCTTAATGATACATCTAGAGTTCAGAGTATATGTATACTCTTAGGAACTCAACCTTCAAATGCTCACTTACC
GGGCACAAAGTTGGTGGCGAAAGCCCACGCATTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCAAGGTTCTCAAGTGGACCCTTACCAGTGACGATGGCC
TGCACGAAGAATCCAAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTCACCTTAAGCTCAGCAAATGCCTCAGGGTCGTCAGCCAGACCAA
GGGGGTCGAAGCTGCCACCAGGGTAGAGTGAGTCGACGATCTCTCCGAGCGGGCCACCGGCAACACGGTACCCCTCGATGGCACCCATGAGCACGACCTG
GCAGGCCCAGATAGCAAGGATGCTCTGAGCATGGACCAAGCTTGGGTTGCCGAGGTAGTCGAGGCCGCCTTCGCTAAAGATCTGGGAGCCGGCCTTGAAC
CAGACCGCCTCGCCGAACTTCACGCCGTTGCGCGCTAGCAGCTCCGGGAATACGCAGCCGAGAGCGCCGAGCATGGCCCAGCGGGAGTGGATCACCTCCA
GCTCACGGTTCTTGGCGAAGGTCTCCGGGTCAGCGGAGAGCCCGGCGGTGTCCCAGCCATAGTCACCTGGGAACTCGCCACTCAGGTAGCTCGGGGGCTC
GCCGGAAAGTGGGCCGAGGTAGAGCACGCGGTCGGGACCGTACCACGGGCTGTTGGAGCTTGCCGCCTTGGCCGTGGCCTTGCGCATGGTGATGCGCCCG
CCGCCGAGGACGGAGGAGGCTCCGGCAAGCTTCATAGCAGGGGAGGACAGAGCCATGGTTGCCGCAGCCATTGCTATTGGACGGAATAGAGCAAGCTGCT
GATGTGCTGCTGCTTCT