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Detailed information on CNT30140877


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 2e-38

BLAST vs NONCODE:
NONSTUT000620, E-value = 3e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226003Lolium perenneHordeum vulgare35.1743.5397.84185forward

Expression of CNT30140877

Peptides detected in this lncRNA

>peptide 1 (30 aa)
ENKYFSIIISQINIGVQKEPPKGDNTGNRI*

>peptide 2 (67 aa)
MVRHLLTTTEAEHQVEGGLLLDVVVSEGAAILELLASEDEALLVRRDALLVLDLRLDVVDGVRGLHLE

>peptide 3 (29 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSR

Sequence

>CNT30140877
GAAAACAAATACTTCTCAATAATAATATCACAAATCAATATAGGAGTACAAAAAGAACCACCGAAAGGAGATAATACTGGAAATAGAATTTAGACACATA
GCAGCATAACAGATATGCATACGCACTAAAATTTCGTAACAAGTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAG
TTTGTAGACACAAGGTGACATAACACGAGACCACAATACAACAGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCC
CAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGA
GGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGAT
GGTGTCAGAGGACTCCACCTCGAGGG