Detailed information on CNT30140839


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 4e-176

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3082954Lolium perenneBrassica juncea49.8716.192.11190reverse complement

Expression of CNT30140839

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MFSLLKPTFSLPLHRPPLSRLLPSKAERSPTDAF*

Sequence

>CNT30140839
AAGCAACCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGGGTAGTACAGGAATATTGACCTGTTGTCCATCGACTACGCCTTTCGGCC
TGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCCTGCGGAGGAAACCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGC
CGACATTCTCGCTTCCGCTTCATCGACCCCCGCTTTCGCGGTTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTGACATCCCACAGCTTC
GGCAGATCGCTTAGCCCCGTTCATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTATTACGCACTCTTTAAAGGCATGCAA