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Detailed information on CNT30140780


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305143Lolium perenneTriticum aestivum56.9569.4494.53475forward
CNT30398809Lolium perenneTriticum turgidum56.9536.1294.32475forward

Expression of CNT30140780

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 2 (54 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQSYSN

>peptide 3 (62 aa)
MVRHLLTTTEAEHQVQGGLLLDVVVRQGATVLQLLTSEDQTLLVRRNALLVLDLRLHVVDGV*

>peptide 4 (31 aa)
AENKYFSIIISQINIGVQKEPPKGDNTGNRI*

Sequence

>CNT30140780
GAGCTGAAAACAAATACTTCTCAATAATAATATCACAAATCAATATAGGAGTACAAAAAGAACCACCGAAAGGAGATAATACTGGAAATAGAATTTAGAC
ACATAGCAGCATAACAGATATGCATACGCACTAAAATTTCGTAACAAGTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGC
ATAAGTTTGTAGACACAAGGTGACATAACACGAGACCACAATACAACAGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTG
AACCCCAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCACCACGGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC
CGCCAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG
TCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGAAGGCGGAGCACCAGGTGGA
GGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTC
CTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC
TGTAAATACGAAGTAGACCAGAGTTACAGCAATG