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Detailed information on CNT30140729


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 1e-84

BLAST vs NONCODE:
NONORUT005433, E-value = 3e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697930Lolium perenneOryza sativa74.8192.6683.17404forward
CNT30519871Lolium perenneSetaria italica69.0756.3495.44373forward
CNT30547549Lolium perenneIpomoea triloba68.747.9378.98371forward
CNT3069242Lolium perenneQuercus suber75.3775.9382.06407forward
CNT30177168Lolium perenneSecale cereale76.8555.8594.22415forward
CNT30283601Lolium perenneTriticum aestivum76.4864.0393.22413forward
CNT30219843Lolium perenneHordeum vulgare65.7461.8593.8355forward
CNT30398097Lolium perenneTriticum turgidum76.6754.1292.03414forward
CNT3084857Lolium perenneVigna radiata65.9328.9980.62356forward
CNT30508643Lolium perenneSolanum lycopersicum22.5915.8681.97122forward
CNT30657055Lolium perenneTriticum dicoccoides76.8579.3593.25415forward
CNT30720909Lolium perenneTriticum spelta76.6763.493.96414forward
CNT30585391Lolium perenneEchinochloa crusgalli76.363.2994.42412forward

Expression of CNT30140729

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSNSPTR*

>peptide 2 (32 aa)
TTQTEPRSLQPDQTSHEQLATAGGPEPRPSRP*

>peptide 3 (77 aa)
MSSSVLFWYLRISRSATVPGRKRCGFFTPPVAGADLRAALVASCFLGALPPVDLRAVCFVRAIGRRGDEARSLVGGLG

Sequence

>CNT30140729
CAACAACACAAACAGAACCAAGATCCCTACAACCGGATCAAACCAGCCACGAACAGCTAGCTACAGCCGGCGGCCCCGAGCCTAGGCCCTCTCGCCCCTG
ATGCGTCGCGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAACAGCCCCACGAGGTAGGCCT
CGGCGGCCTCCTGCAGCGCGGAGACCGCGGAGCTCTGGAAGCGGAGGTCCGTCTTGAAGTCCTGCGCGATCTCGCGCACGAGGCGCTGGAAGGGCAGCTT
GCGGATGAGCAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCGCGCAGCGCGACGGTGCCGGGGCGGAAGCGGTGCGGCTTCTTCACGCCGCCGGTCGCC
GGGGCGGACTTGCGCGCCGCCTTGGTCGCCAGCTGCTTCCTCGGGGCCTTGCCGCCGGTGGACTTGCGCGCCGTCTGCTTCGTGCGGGCCATCGGGCGTA
GAGGGGATGAGGCTCGGAGTTTGGTTGGTGGCTTGGGATT