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Detailed information on CNT30140683


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-85

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30583294Lolium perenneEchinochloa crusgalli59.2924.4992.06466forward

Expression of CNT30140683

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MQKKKKTGSRYKTTNKYSRSRTHQQRDMQTQQNLKLSSGFTYSFITVQFIATAPRQMFVDKYDITLDNKTAGKEDNRPLDQNN*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 3 (45 aa)
MRRCWSGGIPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICK

>peptide 4 (34 aa)
KCKRKKKLDPDIRLQTSTVDQEHISNGICRHNRI*

Sequence

>CNT30140683
AAATGCAAAAGAAAAAAAAAACTGGATCCAGATATAAGACTACAAACAAGTACAGTAGATCAAGAACACATCAGCAACGGGATATGCAGACACAACAGAA
TTTGAAACTAAGTTCAGGGTTCACTTATTCATTCATCACGGTTCAATTCATAGCTACTGCACCACGGCAGATGTTTGTAGACAAATATGATATCACACTA
GACAACAAAACGGCAGGAAAAGAAGATAATCGACCACTCGACCAGAACAACTGACATCCCCAGTGGAGGACACCGAAGACCCCACAGTTGAGAACCCTCA
GAGATTGAATCAGCTCCTTACTGGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCT
CCAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGACGACTC
CACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATG
TTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCT
TGACATTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCATCTGTAAA