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Detailed information on CNT30140539

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30589156	Lolium perenne	Musa acuminata	15.24	30.54	86.81	91	forward
CNT30229217	Lolium perenne	Ananas comosus	9.05	22.59	98.15	54	forward

Expression of CNT30140539

Peptides detected in this lncRNA

>peptide 1 (41 aa)
LSEQRCGCSCTQEEADAVEDAAATGKLSLARWPRNSSAATS*

>peptide 2 (34 aa)
MRARTKMEFSCSVLGSWNSLSSLGTMTGARIAQL*

Sequence

>CNT30140539
GGCTATCCGAACAGCGCTGCGGCTGCTCATGCACCCAAGAAGAGGCCGACGCTGTTGAAGACGCGGCGGCGACAGGGAAGTTGAGCTTGGCACGGTGGCC
GCGGAACTCGAGCGCCGCGACGTCGTAGGCGCGCGCGGCGTCGGCGGCGGTGTCGAAGGTGCCTAGCCACTTCCGCACGGCGCGGTGCGGGTCGCGGATC
TCCGCCGCCCACTTGCCCCACGGCCGCTGCCGCACGCCCCAGAACTTTCCTCCCTTCCTCGCGCGCCGCTTCCGCACGCCGCCATCCTTCACGCAGCTCG
CGGCGGAGCGTTCTTCGCCCTCGCTGCTCGAGGCCGTGGTCGCCGCGGACTCGCAGCCCCGGCACCCATTCGCGCCGCACCTGGCGCACGCGGGAACGGC
GGGGGCAGCAAAGGGTGTTGTCGACGGCTTTTGGTGCAGCGTCGGGACGACGGCGGCGGTGTCACCAGACACGACGGAGATGAGGGCGCGGACGAAGATG
GAGTTCTCCTGCTCGGTGTTGGGGAGCTGGAACTCGCTCTCCAGCCTTGGCACCATGACGGGAGCTCGTATAGCTCAGCTGTGACGTAGAGTGAGGT