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Detailed information on CNT30140466


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 9e-174

BLAST vs NONCODE:
NONMTRT001605, E-value = 6e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395674Lolium perenneTriticum turgidum75.0791.2387.14801forward
CNT30508942Lolium perenneSolanum lycopersicum57.6458.5282.28615forward
CNT30686626Lolium perenneTriticum urartu75.0795.9387.27801forward

Expression of CNT30140466

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MRASPKSVDDGRFLTTFPEKVEEERDMVVVAIGVLRLECRHCLRLLYAFSKSGVNVEML*

>peptide 2 (32 aa)
MARRPFLSSLTFSSENASGSSAKPRGSKLPPG*

>peptide 3 (58 aa)
AYLQKMAGNVQTWIVGESRTLHKIIVIYIVVVQTRLHNITVHWADSLLETSVICRGRS*

>peptide 4 (29 aa)
MAQRLWITSNSRFFAKVSGSAESPAVSQP*

Sequence

>CNT30140466
AGCATATCTGCAAAAAATGGCTGGGAATGTGCAAACATGGATAGTGGGAGAATCTCGCACTTTACATAAAATTATCGTAATTTACATCGTGGTTGTACAA
ACAAGACTACACAACATCACAGTTCACTGGGCCGATAGTCTCCTAGAGACTTCAGTTATTTGCCGGGGACGAAGTTAGTGGCGAATGCCCATGCGTTGTT
GTTGACCGGGTCAGCAATGTGGTCAGCAAGGTTCTCTAGTGGGCCCTTGCCGGTGACGATGGCTTGAACAAAGAAGCCAAACATCGAGAACATGGCGAGG
CGACCGTTCTTGAGTTCCTTGACCTTTAGCTCGGAAAATGCCTCGGGGTCGTCGGCCAAGCCGAGAGGATCAAAGCTGCCACCTGGGTAGAGCGGGTCAA
TGATCTCACCAAGTGGGCCGCCAGCAACGCGGTATCCCTCAACGGCACCCATGAGTACAACCTGACAGGCCCATATAGCTAGGATGCTTTGTGCATGGAC
GAGGCTAGGGTTGCCTAGGTAGTCGAGGCCACCCTCACTGAAGATCTGGGAGCCGGCCTTGAACCAGACAGCCTCGCCAAACTTGACGCCATTGCGGGCG
AGCAGCTCAGGGAAGACACAACCCAGTGCCCCGAGCATGGCCCAGCGACTGTGGATCACCTCCAACTCCCGGTTCTTCGCGAAAGTCTCGGGGTCGGCAG
AAAGTCCAGCGGTGTCCCAGCCATAGTCACCTGGGAACTCACCAGTCAGGTAGCTTGGGGGCTCACCTGAGAGTGGACCAAGGTAGAGCACGCGGTCGGC
ACCATACCATGGGCTACCAGAGGAGACCTGCTTTGCCTTCGCCGCAGTCTTGCGCATCGTAATGCGGGCCTCGCCGAAAAGTGTGGATGATGGGAGATTC
TTGACTACCTTTCCAGAGAAGGTCGAGGAGGAGAGGGACATGGTGGTGGTCGCCATTGGAGTGCTAAGACTTGAGTGCAGGCACTGCTTGCGTCTCCTCT
ATGCTTTCTCCAAGAGTGGTGTGAATGTGGAGATGCTCTAAGAGGATACGAGGAGGTGATATTTAAA