Detailed information on CNT30140316


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176977Lolium perenneSecale cereale13.5142.4492.53174forward

Expression of CNT30140316

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MGHYLHLVRRTTSVKGPIHNWQHKRCKYDRHDIIKEATRDPFIPITYEERGTVAPPPSPSPSPSFPPLHSHRFDLIS*

>peptide 2 (81 aa)
MSKYFLLFLYVHICTLSGQNQGQLMKNCKLSILPSQRGHKETHLRVWRALVWRQLTHMACMYHGPLPSPRQTDNFREGAYT*

>peptide 3 (31 aa)
MLSALWHNKMTNETFNHDIDKRVFILIRSYH*

>peptide 4 (31 aa)
KLTANNIDSIAIDIIRIFRLLGGFLEYLKLR*

>peptide 5 (63 aa)
MYTFWTESRAINEKLQVVYFTKSKRPQRDASESLASTSMAAAHPYGMHVPWATTFTSSDGQLP*

Sequence

>CNT30140316
AAAATTAACAGCTAATAACATTGATTCAATTGCAATTGACATAATAAGAATATTTCGTCTATTAGGAGGATTCCTCGAATACCTAAAATTGAGATGATCG
TAGAAAAAGTGAAATATTTAATAGGATCATTTCAGAAACATGGAATGTTAGAGAAATTCAAATTATGCGAGGCTTAGAAAGAAGTCCTGCATAGAGTCCA
CGGAGAGCCTATTTGGGGTTTTTATATAAAAAGAAGAAGAAGCAATGTAATTGAAGCAACCATCTTTATCCATGTTTAAATCCAAAATATCTCTCTCACA
TTGCCAATAATGACTAATTATTGAAAAGATGTCCAAATACTTTCTTTTATTTCTCTATGTGCATATATGTACACTTTCTGGACAGAATCAAGGGCAATTA
ATGAAAAATTGCAAGTTGTCTATTTTACCAAGTCAAAGAGGCCACAAAGAGACGCATCTGAGAGTTTGGCGAGCACTAGTATGGCGGCAGCTCACCCATA
TGGCATGCATGTACCATGGGCCACTACCTTCACCTCGTCAGACGGACAACTTCCGTGAAGGGGCCTATACATAATTGGCAACACAAGCGCTGCAAATATG
ATAGACACGACATAATTAAAGAAGCCACCCGAGATCCATTTATCCCAATCACATATGAGGAGAGGGGAACCGTTGCTCCACCTCCATCTCCATCACCATC
TCCATCCTTCCCCCCTCTCCATAGCCATAGATTTGACTTGATCTCTTGATCTCATCACAGTTAGTGACATTGTAAGACTATTTGGTATTGATCTTAAGAA
TTTCTAGAAATATATTATGATTGTTGATCTTATCATGTGCAAGTAGTCCTAACGGGCATCTAACTTTACATGAGTGTTATGTGCATCTAACTTTAGATTA
GTGTTGTGCTTTAATTACATATAATATTTGAATGATTGTATATCTCCTGCCTCAATCTAGGACTTGTCAGGTATCCAAGACCCCGATGATTGATAAAGAT
AATGAGGTCAAATGAGTGGTGATCTGCCGCTTCATGCGAAACCAAGTGACATGAGAGGGAGTACAGTAGTACTTTGAGATCCATTAGGAAATAAAGGGGT
ACAAATGTGATTGGAATACACATGAAGACAGAAATCTGGGGTCACATGAAACCAAATAAAATGGAGAAACTATGCTAAGTGCTCTTTGGCACAACAAAAT
GACAAATGAAACATTTAACCATGATATAGATAAAAGAGTTTTCATATTGATACGATCATATCATTAGCATGATTTCTCTTTAGACATG