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Detailed information on CNT30140161


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 5e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Lolium perenneOryza sativa14.1310098.75481forward
CNT30670969Lolium perenneSetaria viridis29.8589.041001016reverse complement
CNT30641383Lolium perenneNymphaea colorata41.5745.2994.631415forward
CNT30550219Lolium perenneIpomoea triloba41.4232.4798.161410forward
CNT30702366Lolium perenneQuercus lobata29.2610098.49996reverse complement
CNT30378673Lolium perenneArabidopsis thaliana21.1557.7496.67720reverse complement
CNT30618996Lolium perenneSesamum indicum23.1216.5597.2787forward
CNT30283003Lolium perenneChenopodium quinoa26.4194.1497.66899reverse complement
CNT3020470Lolium perenneCitrullus lanatus9.9362.7198.52338reverse complement
CNT30632346Lolium perenneVigna unguiculata40.1348.8497.881366forward
CNT30505560Lolium perenneNicotiana attenuata40.8662.9197.481391reverse complement
CNT30299053Lolium perenneTriticum aestivum76.6772.8499.042610forward
CNT30569655Lolium perenneActinidia chinensis41.339.4897.31406forward
CNT30555751Lolium perenneOryza glaberrima12.5159.7597.65426reverse complement
CNT30147396Lolium perenneMedicago truncatula40.5746.4297.611381forward
CNT30438197Lolium perenneAegilops tauschii30.4999.1499.811038forward
CNT30258698Lolium perenneAvena sativa12.3451.9898.81420reverse complement
CNT3017954Lolium perenneZea mays46.3641.6599.051578forward
CNT30605068Lolium perenneGossypium raimondii34.0275.7997.061158reverse complement
CNT30216563Lolium perenneKalanchoe fedtschenkoi40.4535.4198.041377forward
CNT30655407Lolium perenneRosa chinensis41.141.8597.571399forward
CNT30628241Lolium perenneDaucus carota38.4348.4498.931308reverse complement
CNT30688989Lolium perenneTriticum urartu57.298.9899.491947forward
CNT30346087Lolium perenneEragrostis tef24.8881.91100847forward
CNT30595568Lolium perenneOryza meridionalis11.2898.9797.92384reverse complement
CNT30359771Lolium perenneLactuca sativa28.2692.0697.19962forward
CNT30429739Lolium perennePapaver somniferum38.2840.594.171303forward
CNT30571858Lolium perenneVitis vinifera42.2741.5298.051439reverse complement
CNT3056076Lolium perenneAmborella trichopoda34.495193.021174forward
CNT3038324Lolium perenneCucumis melo38.6369.7297.641315reverse complement
CNT30103741Lolium perenneOryza rufipogon12.4380.4295.98423reverse complement
CNT30557400Lolium perennePanicum hallii19.2447.7498.17655forward

Expression of CNT30140161

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MSAKAVALPYTRIRFLAGADTDFSLKAKTLKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCPFLSHFSPRLFHLP*

>peptide 2 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

>peptide 3 (46 aa)
RQVEESSNRPWRTEPTYVAKYGDDLWLGVKGQPRSDIAGFPRNLFQ*

>peptide 4 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 5 (45 aa)
MNEMNECGRSPDDKCVIRSLSFSCLYRNESIKFLLEQNYRISPSG*

>peptide 6 (74 aa)
MMTTFCIISQSRIGSRRNHNLTLIRKFHGSLYKLEFINEIHSIYNSNEVWRQRGVLPAEINAMVSRINDGYSEFH

>peptide 7 (32 aa)
MVVYINWSSLMRFTQSIIRMRCGGRGASYPLK*

>peptide 8 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

>peptide 9 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 10 (42 aa)
MCFQYPNLQGMNANQKTSQLTKSMNRRYDDHFLYYLTKSNWI*

Sequence

>CNT30140161
GCGTCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCA
AGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATT
TCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCC
CAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAA
GAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCA
AGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCC
TGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTC
CGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCC
CCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTT
CCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAAACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTAC
ACGCGCATACGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAGGCGAAGACTCTGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGC
TCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCCCTTCCTTTCTCATTTCAGTCCTCGCCTTTTTCA
TCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGAGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGC
GACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACA
GGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATC
TTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTG
CCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTC
CTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGT
ACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAA
CGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGG
GGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGAC
CGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGG
CTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTT
CGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAACC
CTAGTACGAGAGGACTGGGTTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCC
GCGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACCGCGAGGTGTGAAGCGATCTCGTA
CTAAACGAATGGAAATTGACAACAATAAAAAAAACATAACTTAGAAAGAGAGGTTCTGAAAGGTAAAAGGACTGGAAATCCTTGTTTAGCGCCCTGGACT
CGAAATCCAATTTGTGCTAGTGGTTCGAATCCACAACAGAACAATGAATGAATGAAATGAATGAATGTGGGCGGTCCCCAGACGACAAGTGTGTGATCAG
AAGCCTTTCCTTTAGCTGTTTGTACAGGAACGAATCAATCAAGTTTCTACTAGAACAGAACTATAGAATCAGTCCGTCCGGTTAAGCATTGGGGAGCTGA
TAGGTCGAACGGAGTGGTGCCAGAGCTCTAAAGTGGCTCGTGCCTATCCATTTCTTTGATTTTCCTGTGTGCTTTTTAGGCGGCTATCAAGCCTTAGCCA
GAAAGCACTTACATTTGAGACCGGGCACTTCGTCATCAGGTGGAGAAGAACGAACGGACATTTCCGATCTTTTGTATTCGATTCGGATCTCTATTCAATG
TGTTTTCAATACCCTAACCTCCAAGGGATGAACGCAAACCAAAAAACCAGCCAACTTACCAAGAGTATGAATAGAAGATATGATGACCACTTTTTGTATT
ATCTCACAAAGTCGAATTGGATCTAGAAGGAATCACAACCTCACTCTTATTCGGAAATTTCATGGTAGTTTATATAAATTGGAGTTCATTAATGAGATTC
ACTCAATCTATAATTCGAATGAGGTGTGGAGGCAGAGGGGCGTCTTACCCGCTGAAATAAATGCCATGGTGTCACGTATAAACGATGGTTATTCTGAATT
TCAT