« Back to Lolium perenne search


Detailed information on CNT30139990


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 4e-144

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-31

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30722304Lolium perenneTriticum spelta47.7195.6688375forward

Expression of CNT30139990

Peptides detected in this lncRNA

>peptide 1 (35 aa)
IENMARRPFLSSLTFSSANASGSSAKPRGSKLPPG*

>peptide 2 (52 aa)
MASPNLMPLRASSSGKTQPSAPSMAQRLWITSNSRFFAKVSGSADSPAVSQP*

>peptide 3 (40 aa)
MISPSGPPATRYPSTAPMSTTWHAQIARMLCAWTRLGLPR*

>peptide 4 (59 aa)
MRASPKSVDDGRFLTTFPEKVEEERDMVVVAIGVLRLECRHCLRLLYAFSKSGVNVEML*

Sequence

>CNT30139990
CATCGAGAACATGGCGAGGCGACCGTTCTTGAGTTCCTTGACCTTTAGCTCGGCAAATGCCTCGGGGTCGTCGGCCAAGCCAAGAGGATCGAAGCTTCCA
CCTGGGTAGAGCGGGTCAATGATCTCACCAAGTGGGCCACCGGCAACGCGGTACCCCTCAACGGCACCCATGAGCACGACTTGGCATGCCCAAATAGCGA
GGATGCTTTGTGCGTGGACGAGGCTAGGGTTGCCGAGGTAGTCAAGGCCACCCTCACTGAAGATTTGGGAGCCGGCCTTGAACCAGATGGCCTCACCGAA
CTTGATGCCATTGCGAGCAAGCAGCTCGGGGAAGACACAACCGAGTGCCCCGAGCATGGCCCAACGACTGTGGATCACCTCCAACTCTCGGTTTTTCGCA
AAAGTCTCGGGGTCTGCGGACAGTCCGGCAGTGTCCCAGCCATAGTCACCGGGGAACTCACCGGTTAGGTAGCTTGGGGGCTCACCAGAGAGTGGACCGA
GGTAGAGCACGCGGTCGGCACCATACCATGGGCTACCAGAGGAGACCTGCTTTGCCTTCGCCGCAGTCTTGCGCATCGTAATGCGGGCCTCGCCGAAAAG
TGTGGATGATGGGAGATTCTTGACTACCTTTCCAGAGAAGGTCGAGGAGGAGAGGGACATGGTGGTGGTCGCCATTGGAGTGCTAAGACTTGAGTGCAGG
CACTGCTTGCGTCTCCTCTATGCTTTCTCCAAGAGTGGTGTGAATGTGGAGATGCTCTAAGAGGATACGAGGAGGTGATATTTAAA