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Detailed information on CNT30139766


BLAST search results

BLAST vs Swiss-Prot:
sp|P55308|CATA2_HORVU, E-value = 2e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692523Lolium perenneOryza sativa68.1628.2685.93334forward
CNT30519701Lolium perenneSetaria italica53.2719.2190.42261forward
CNT3020926Lolium perenneCitrullus lanatus53.0637.380.38260forward
CNT30185311Lolium perenneSecale cereale97.7634.0493.74479forward
CNT30304171Lolium perenneTriticum aestivum28.9819.895.07142forward
CNT30223857Lolium perenneHordeum vulgare30.4159.1388.59149forward
CNT30552865Lolium perenneOryza glaberrima28.9852.494.37142forward
CNT30243876Lolium perenneAvena sativa28.1618.3395.65138forward
CNT30663894Lolium perenneTriticum dicoccoides27.555.7489.63135forward
CNT301996Lolium perenneZea mays19.822.2593.8197forward
CNT30347744Lolium perenneEragrostis tef75.123.587.23368forward
CNT30369978Lolium perenneOryza glumipatula56.5336.8887277forward
CNT3037432Lolium perenneCucumis melo22.2427.1883.49109forward
CNT30575497Lolium perenneOryza barthii40.215.7187.82197forward
CNT30116279Lolium perenneOryza nivara28.577.0585.71140forward

Expression of CNT30139766

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MVSGEPRSWMTVEKRTMTGVRAPGARRKSAQVRPVTSCVHSKKPLAEAPRACTTRSGMRSRAKCAIFSSRW*

>peptide 2 (39 aa)
GVVEVLGGVAVVLAADEGGLVVHEAADAAGGLPVELDVA*

Sequence

>CNT30139766
GGAGTCGTAGAGGTCCTGGGTGGCGTGGCTGTGGTTCTTGCCGCCGACGAGGGTGGCCTCGTCGTCCATGAGGCAGCTGACGCCGCAGGTGGGCTTCCAG
TGGAACTTGACGTAGCGTGACTTGCCGTCGCGGGTGACGAAGACGGGGAAGTTGTTGCCCAGCAGGTCCCAGTTGCCCTCGCGCGTGTAAAACTTGACGG
CGAACCCGCGCGGGTCGCGGATGGTCTCCGGCGAGCCACGCTCGTGGATGACGGTGGAGAAGCGGACGATGACCGGGGTGCGCGCCCCGGGCGCGCGCAG
GAAGTCGGCGCAGGTGAGGCCGGTGACGTCGTGCGTGCACTCGAAGAAGCCCTTGGCGGAGGCGCCGCGCGCGTGCACGACGCGCTCCGGGATGCGCTCG
CGTGCGAAGTGCGCGATCTTCTCCAGTAGGTGGTAGTCCTCCAGCAGGATCGGGCCGCGCGGGCCGACGGTGAGCGCCTCGTTGTCGTTC