Detailed information on CNT30139718


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670693Lolium perenneSetaria viridis14.8124.2492.8656forward
CNT30619260Lolium perenneSesamum indicum22.497.9885.8885forward
CNT30612366Lolium perenneArabis alpina16.6723.2585.7163forward
CNT30651401Lolium perenneRosa chinensis18.7826.4984.5171forward
CNT3021984Lolium perennePopulus trichocarpa22.493.9783.5385forward

Expression of CNT30139718

Peptides detected in this lncRNA

>peptide 1 (41 aa)
KSLKTIDTSLKPPLILPLFHSKNKCLLLQPSQGTKHSKSSA*

>peptide 2 (67 aa)
MRQGSQWPATSLYWTPSLVPVGSGLVRTLDRDADVVRLGLGEGLRPSRRGAWGERTPSSRTCQTSSRS

Sequence

>CNT30139718
AAATCTTTAAAAACCATAGACACATCCCTTAAACCACCATTAATACTGCCATTATTCCACAGCAAAAACAAATGCCTCCTCTTACAACCCTCACAGGGCA
CAAAACATAGCAAGTCCTCCGCCTAAGACAGAATGTAAGATAATGCAAAAAAAATAGGATAGTTGATAATTCGATGCGGCAGGGTTCACAGTGGCCAGCC
ACAAGTCTGTACTGGACACCCTCTCTAGTACCGGTAGGCAGCGGGCTTGTAAGGACCCTCGACCGGGATGCTGATGTAGTCAGACTGGGACTTGGTGAAG
GGCTGCGACCTTCTCGTCGAGGTGCTTGGGGAGAACGTACACCTTCTTCTCGTACTTGCCAGACTTCCTCTCGTTCCA