Detailed information on CNT30139060


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673536Lolium perenneSetaria viridis35.5366.587.41135forward
CNT30239996Lolium perenneAvena sativa16.0520.3395.0861forward
CNT3068379Lolium perenneLeersia perrieri32.3720.1390.24123forward
CNT30604840Lolium perenneOryza punctata31.0533.8188.98118forward

Expression of CNT30139060

Peptides detected in this lncRNA

>peptide 1 (57 aa)
LLLPHFLSFCIRLGLLLRKLYLLEELSIDIVSKSSLLGEEGQCHPGLVQTHIPTLAV*

Sequence

>CNT30139060
CCTTGCTCCTCCCCCACTTCTTGAGTTTTTGCATCAGATTGGGCCTTTTGCTTAGGAAGCTGTATCTGCTGGAAGAACTGTCAATTGACATAGTGTCGAA
GTCTTCGCTTCTGGGGGAAGAAGGTCAGTGTCACCCTGGCCTCGTTCAGACCCATATTCCAACATTAGCTGTTTAGCCCTCTCCTGTGATTTTGGGCTAA
GCGTCCTGTTGAGGTCACGGGCAGACATTTTTCCTGATGGTATCTGGTAGTTGCGGAGCTCGAATCGCAGACAAGCATTGACCCACCGCAGGACCAGGAG
GAGAGCATGTGTATCTTGGTGGGCTTCTCTTTTGCTGTTTCTGTGATGCATAGAAGGCTTGTGTCTTTGGAAGATTGTGG