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Detailed information on CNT30139041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673517Lolium perenneSetaria viridis34.2153.584.62130forward
CNT30118086Lolium perenneOryza nivara51.5845.984.18196forward

Expression of CNT30139041

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRWEVDGGLLELSSQFGQASTGLPPGDCSGYH*

>peptide 2 (35 aa)
LFSISPIMLLLLSETFDVFDPKEVVFLASRFIRLW*

Sequence

>CNT30139041
TCTGTTCTCAATCTCTCCGATCATGTTGCTTCTGTTATCAGAAACATTTGATGTTTTTGATCCCAAAGAAGTTGTGTTCTTAGCTTCACGTTTCATCAGA
CTCTGGTAGAACTCCACAACCTCCGGAGCACGGTGTACCTTGTCACCACCGGCAACACTCTTGGATAGAGAACCAGGAGGTGGTGGTGGAGGCGGCGGAC
CACCAGGAGGAGGTCCACCTGGTGGACGTGGCGGCAGCGGTGCTCCGCCTGCAGTGTTGGTAGCTCCTGAAGCAACAGCTGATGCGGTGGGAGGTGGACG
GGGGACTCTTGGAGCTCTCTTCTCAATTTGGGCAAGCTTCAACTGGGTTACCGCCAGGGGATTGTTCTGGTTATCACTAG