Detailed information on CNT30138315


BLAST search results

BLAST vs Swiss-Prot:
sp|P26913|NLTPB_WHEAT, E-value = 1e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30386779Lolium perenneTriticum turgidum64.0419.4984.93146forward
CNT30436289Lolium perenneAegilops tauschii64.0432.385.62146forward
CNT30250949Lolium perenneAvena sativa92.5452.6291.94211forward
CNT30658660Lolium perenneTriticum dicoccoides64.0420.0585.62146forward
CNT30104413Lolium perenneOryza rufipogon61.8420.5585.11141forward

Expression of CNT30138315

Peptides detected in this lncRNA

>peptide 1 (74 aa)
DADAAFAGDAGGVAHVDALERPRQVLEALPLRDLTPLQHPADGVAAFPIAYDMHGAMAEVTSLQLTAADAVPAAA

>peptide 2 (30 aa)
TLTLHLPGMLAALPMLTPLNDPARFLRPCR*

Sequence

>CNT30138315
AGACGCTGACGCTGCATTTGCCGGGGATGCTGGCGGCGTTGCCCATGTTGACGCCCTTGAACGACCCCGCCAGGTTCTTGAGGCCTTGCCGTTGAGGGAC
CTCACCCCGCTGCAGCACCCCGCCGACGGCGTCGCCGCCTTTCCCATCGCGTACGACATGCACGGCGCGATGGCGGAGGTCACGTCGCTGCAGCTCACGG
CCGCCGACGCCGTCCCCGCCGCCGCCAG