Detailed information on CNT3013831


BLAST search results

BLAST vs Swiss-Prot:
sp|Q940H8|FRL4B_ARATH, E-value = 3e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30580685Zea maysEchinochloa crusgalli10078.0386.32753forward
CNT30496079Zea maysDigitaria exilis99.7384.6785.35751forward

Expression of CNT3013831

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MMHGLGRLWRMRRGMGRCWRMTRGRETGSMWWELGEKTRKHC*

>peptide 2 (35 aa)
MLPSSSRSWLSLVLQVASEDPPVETQLLVYDPQHT*

>peptide 3 (39 aa)
TQPTVVVSRYKTGPLSGVSSRWHHQLLSCHSSATSSFPD*

>peptide 4 (37 aa)
PTYRCSQSLQNRAIERGFESLASSVVVMSFISDFFVS*

>peptide 5 (65 aa)
MRLVAGPPLPPLVALDAAFFFSVLAFSSSSSCFRRPSSGNSASSLRSSTHLMTARSADCSFLFTLL

Sequence

>CNT3013831
ACCCAACCTACCGTTGTAGTCAGTCGCTACAAAACAGGGCCATTGAGCGGGGTTTCGAGTCGTTGGCATCATCAGTTGTTGTCATGTCATTCATCAGCGA
CTTCTTCGTTTCCTGACTGAACCTACCGGTAGTAAGCCTGGTGGAAGGCAGGAGCCATTCCATTGGTGTAAGCTGGCATCCCGTTGCCATAGCCGCCGTA
GGGGGCAGCAGGGTAGCTCATGGGCGGGGTGGAGTAGGCCATGGGAATGCCGACGTTGACGGTGGCTACCTCCTCAGCTGGGTAAACATATGGCTCCCTG
ATCACCGGCGGGCTCCGGGTGCAGTACACGCCGTGTCCAACCGGCCTGTCGTAAGGGTAAGGGGAGGGTGTGGCGTATGATGCATGGGTTGGGGAGACTG
TGGCGTATGAGGCGTGGGATGGGGAGGTGTTGGCGTATGACGCGTGGGAGGGAGACTGGGTCAATGTGGTGGGAGCTGGGAGAGAAGACACGCAAGCATT
GTTAGTGAGACGACCTGCCTTGGCAGGAGGCATTGGGCCTCCAGTGCTCGCACGGATGCGCTTGGTTGCAGGGCCGCCGCTGCCGCCACTGGTAGCGCTT
GATGCTGCCTTCTTCTTCTCGGTCTTGGCTTTCTCTAGTTCTTCAAGTTGCTTCCGAAGACCCTCCAGTGGAAACTCAGCTTCTAGTTTACGATCCTCAA
CACACTTGATGACAGCTCGCAGTGCAGACTGTTCTTTCTTGTTCACATTGCTC