Detailed information on CNT30138205


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJA7|SOX_ARATH, E-value = 5e-29

BLAST vs NONCODE: nothing found

Expression of CNT30138205

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVHESASSRILGCQLAGRQWIPYARAACIQGN*

>peptide 2 (55 aa)
GIRSISVSRWISVRVVHCVIFLISYDDAQCKSEKMLKYLCIPLLSIIDSTNKNMR*

>peptide 3 (42 aa)
MKYTTCHEANGSIKTRCMLISLLSFWTAAVSIFLMKNHLGQV*

>peptide 4 (91 aa)
MATALVAFITPPNLLLAIVHPSGTLNTSAHFGLAPPSPAASSVAPPLATAATNAGSSLGPRSTCGVGVSTEYPASRWASSQRRRERRTSGG*

>peptide 5 (65 aa)
MVRDSPCDEPSWCSRSKRSSRSTRAPRDAAACAAQLPMMPAPTTITSNRSGAGAAAMLAFAGARA*

>peptide 6 (36 aa)
MHAYFIIIILDSCGLYFSNEKSSWTGMIQLKIKCKN*

>peptide 7 (35 aa)
MHPRKLVRGESRNTCDMRGITHLASWRRRPPRPCP*

Sequence

>CNT30138205
AAGGAATTCGATCAATTTCAGTTAGTCGATGGATTTCAGTTCGTGTAGTACATTGTGTTATCTTTTTAATTAGCTATGATGATGCACAGTGCAAGTCTGA
AAAGATGCTTAAATATTTATGTATTCCACTCCTGAGTATCATAGATTCAACAAACAAAAATATGCGATGAGAATATTTCTGAAGCTCTAGTTTGCTCTAG
TTCAGAATACTTCCGGGTCTCATATAATTTGTTAACAATTAATTAAATGTATTTAATAGCTAGGAGATAAGTACTCCTATCTGATAGCTGCTCGCTTCAC
TGGTGGCCTGCAGGTTCCATTATGCGCACCAAACAAAATCATGAAGTACACTACATGTCATGAGGCAAATGGGAGTATAAAGACAAGATGCATGCTTATT
TCATTATTATCATTTTGGACAGCTGCGGTCTCTATTTTTCTAATGAAAAATCATCTTGGACAGGTATGATTCAACTAAAAATTAAGTGTAAGAATTAGAC
AATATTCAAAGAGACATTTGCATGTAGCGACGTATAGGTACAGGTACATCAGCTGAACCAAACTATGATGCTCAAAGCGTCACAGCTAGCTAGAGAACAA
CGACAGTTCATATACGAGTAAATTAAAGCCTCCATATAAGTAAATACAAATAATATGTTTTTCTTATGTTCTAAACATAGCAAGATCAGGACAGAATTTG
TGAAATAGGAGCAGAATTTGTCTCTAACGAAAAGGTTGCAGGACAGCAACGTTCACGGATAAATGGTCCACGAAAGCGCTAGCTCCCGCATACTCGGTTG
CCAACTTGCCGGTCGCCAGTGGATCCCATATGCAAGAGCCGCATGCATCCAAGGAAATTAGTTCGCGGTGAGAGCAGGAACACGTGCGACATGCGTGGCA
TCACTCACCTTGCTTCCTGGCGACGTCGACCACCTCGGCCCTGTCCCTGACGACGGCGCCCATCTTGACGGCGAGCGCCTGGAACATGGCCACGGCCTTG
GTCGCCTTCATCACCCCGCCCAACTTGCTGCTCGCCATCGTCCACCCTTCCGGCACCCTGAACACCTCCGCCCACTTTGGCCTGGCTCCACCCTCGCCGG
CGGCGAGCTCCGTGGCTCCACCGTTAGCGACGGCGGCGACGAACGCGGGATCGTCCTTAGGCCCCAGGTCGACGTGCGGCGTGGGCGTGAGCACGGAGTA
TCCGGCGTCGCGCTGGGCGTCGTCCCAGAGGCGGCGCGAGAGGCGGACCAGCGGCGGGTAGTGCGGCTGCGGGTAGGTGGCGCGGATGGTGCGGGACTCG
CCGTGCGACGAGCCGAGCTGGTGCAGCAGGTCGAAGCGCTCGAGCAGGAGCACGCGCGCGCCCCGGGACGCCGCCGCGTGCGCCGCGCAGCTGCCCATGA
TGCCCGCGCCCACCACGATCACGTCGAACCGGTCGGGCGCCGGAGCTGCTGCCATGCTGGCTTTTGCTGGTGCGAGGGCCTGAGATTCCTTTGGTTCTCC
CAGCGACGGCGGCAGCGCGGTAGGGTTTAGAAGGGATGGGATGGGGCTTGCTCCGTTGCTCCCAGCCGTGCGCCCGCGACCATCCAACGAC