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Detailed information on CNT30137863


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6K7E6|ERF1_ORYSJ, E-value = 1e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696022Lolium perenneOryza sativa21.596.3397.0668forward
CNT30671819Lolium perenneSetaria viridis35.5639.386.61112forward
CNT30554930Lolium perenneOryza glaberrima21.597.7997.0668forward
CNT30344350Lolium perenneEragrostis tef22.549.295.7771forward
CNT30362453Lolium perenneSorghum bicolor27.9415.2592.0588forward
CNT30371074Lolium perenneOryza glumipatula21.596.9597.0668forward
CNT30103395Lolium perenneOryza rufipogon21.595.797.0668forward
CNT30577705Lolium perenneOryza barthii21.596.0397.0668forward
CNT30496193Lolium perenneDigitaria exilis27.325.3789.5386forward
CNT30604579Lolium perenneOryza punctata24.7615.2384.6278forward
CNT30551639Lolium perenneOryza brachyantha20.3215.6195.3164forward

Expression of CNT30137863

Peptides detected in this lncRNA

>peptide 1 (54 aa)
LSGNKRFQWKDEINIFSWLCMNLLVSKGKHRKQIIVSIAQMIESLILAGLWKWS*

Sequence

>CNT30137863
TCTCAGTGGGAACAAGAGATTTCAATGGAAGGATGAAATCAACATTTTCAGCTGGCTTTGCATGAACCTTCTTGTCAGTAAAGGCAAACATCGCAAACAA
ATCATTGTCTCCATTGCTCAGATGATTGAAAGCCTCATCCTCGCAGGTCTTTGGAAGTGGAGCTAGCTTAGCTGATTTGGCAGCAGTTGGCTTCAAGGTG
GACTTCTCAACAATTGGCTTAAGGGTAGACTTCTGAGCCGCTGGCACTTCATCAGGAAAGTTGACCTTGGCTTTCTTTCCACGGATCTTGCGGGCTTCAG
CATCATATGCCCTAG