CANTATAdb - search

Detailed information on CNT30137663

BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 4e-120

BLAST vs NONCODE:
NONMTRT001605, E-value = 4e-23

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30709643	Lolium perenne	Glycine max	71.53	51.4	83.43	495	forward

Expression of CNT30137663

Peptides detected in this lncRNA

>peptide 1 (42 aa)
KQKYCAHKTPKGTDFRKRHILHENPGNLHHHGSTDQTKRCVP*

>peptide 2 (43 aa)
MACTKKPNMENMARRPFLSSFTLSSAKASGSSARPRGSKLPPG*

>peptide 3 (36 aa)
MDKAGVAEVVESTLAEDLGASLEPHGLSKVDTVAGK*

Sequence

>CNT30137663
TAAAACAGAAATATTGCGCTCATAAAACACCAAAAGGCACGGACTTCAGAAAGAGGCATATTTTACATGAAAATCCTGGTAATTTACATCATCATGGTAG
TACAGATCAAACCAAACGGTGTGTTCCGTGAAATACACCGTGTGTCCTGACACAACTACAACTCGCAGCCGTCAACAACTAATTACTTGCCGGGAACAAA
GTTGGTGGCGAAAGCCCATGCGTTATTGTTGACAGGGTCGGCAAGATGGTCGGCCAGGTTCTCTAGAGGGCCCTTGCCGGTGACAATGGCCTGCACAAAG
AAGCCGAACATGGAGAACATGGCAAGACGGCCGTTTTTAAGTTCCTTCACCTTGAGCTCCGCGAAAGCCTCAGGGTCATCGGCAAGACCGAGGGGGTCGA
AGCTGCCGCCAGGGTAGAGTGGGTCAACGATCTCACCGAGCGGGCCACCAGCAACACGATACCCCTCGACGGCACCCATGAGCACAACCTGACAGGCCCA
AATAGCGAGGATGCTTTGGGCATGGACAAGGCTGGGGTTGCCGAGGTAGTCGAGTCCACCCTCGCTGAAGATTTGGGAGCCAGCCTTGAACCACACGGCC
TCTCCAAAGTTGACACCGTTGCGGGCAAGTAGCTCGGGGAAGACGCAGCCAAGCGCACCGAGCATAGCCCACCTGGAGTGGATCACCTCCAG