Detailed information on CNT30137624


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30151037Lolium perenneBrachypodium distachyon45.8238.7688.4181forward
CNT30578192Lolium perenneOryza barthii75.4433.6387.92298forward

Expression of CNT30137624

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MWPLGISYSLPSLVVTLKSMCDWRSSMISGGWSRSASLMHR*

>peptide 2 (49 aa)
RCKTVGVVRVWVLEDMREPVSKSRRCRDDVALGDIILFAFPRGHTEVNV*

Sequence

>CNT30137624
CAGGTGCAAAACGGTCGGGGTCGTACGAGTCTGGGTTCTTGAAGATATGAGGGAGCCTGTTAGCAAAAGCAGGAGATGTCGCGACGATGTGGCCCTTGGG
GATATCATACTCTTTGCCTTCCCTCGTGGTCACACTGAAGTCAATGTGTGACTGGCGAAGCAGCATGATCAGCGGCGGGTGGAGCCGGAGTGCCTCCTTG
ATGCACCGGTAGAGGACATCCATCTCCGCCAAGATGTCATGATCAATCTTGTCACCGTGCCTCTTCATGACCCGCTTCTGCTCCTCTACAGCCTCTGCAA
AGTACTGCTGGAACTTGAGTAGGTAGGGGAAGATGACACTGATTGGGATCATCCCATTGTCGAGATCATGGAAGAGAGCAGAAACATCATCAAAT