CANTATAdb - search

Detailed information on CNT30137565

BLAST search results

BLAST vs Swiss-Prot:
sp|Q39255|SKP1A_ARATH, E-value = 2e-35

BLAST vs NONCODE: nothing found

Expression of CNT30137565

Peptides detected in this lncRNA

>peptide 1 (42 aa)
TFQRPCWYDHICSPQCENSGSLLPYAICCSCMSTSKINCYAS*

>peptide 2 (45 aa)
PLSSVLAGMITFAPLNARTLAVSFPMPFVAPACQQVKSTVMPPRF*

>peptide 3 (29 aa)
MIAQLFYSGSSAPKWNNYENSTALLSSLH*

>peptide 4 (37 aa)
MRSKRVAWSTLTNSASQFLRSSAGAGGAAAEELVIIFL

>peptide 5 (32 aa)
MLKVLRISSGVLPLIMSATVWQVRSSRPLMLR*

Sequence

>CNT30137565
CCACTTTCCAGCGTCCTTGCTGGTATGATCACATTTGCTCCCCTCAATGCGAGAACTCTGGCAGTCTCCTTCCCTATGCCATTTGTTGCTCCTGCATGTC
AACAAGTAAAATCAACTGTTATGCCTCCTAGGTTCTGAACAGATTATACTACAGGTTGGCTTGTGAACCATGATAGCTCAATTATTTTATTCAGGAAGCT
CTGCTCCAAAATGGAACAATTATGAAAACAGTACTGCTTTGCTCAGTTCATTGCATTAATAGAACCTGCTACTACATCCTCTTGGAAGATTGAACAATAC
AGTATGACATAGAAATATCTTATTGCAGTAATGGAACCTAGACTTGATACAGGTTTACGGTAAAACAACAAAATAGTAGTAATAATGCATCTTCTTAGAA
GATTGAACAATAGTATTACAGTACATATTTCTTCTAATCTGCCAATGTAAAACTTTATTTTAGCTAGCAAAAGATCCACTTGATTGGGTTCACAAGTTAT
GACCGCTGACTAATGATAGATAGTTTTCGTTCCAGACATAACCAACCACTGAAGTAAAATGTTCAGAAACCAGGGTTTGCGGTAAAACAACAAAATAGTA
CTACTATTATTACATCTTCTTACAGATTGAACAATAGTGTTGTTACAGTACAGATTTCTTGTAATCTGCCAAAGCAAAATATCCACTTGACAATACCAAT
TTTGTTCACAAATTATGACCACTGATCAATGATAGATAGTTTTGTTCCAGACATGACCAACCACTGAAGATAGATGTTGACAAACTGGACCTAGACTTGA
TGCTTGTTTACGGTAAAACAACAAATAAATACTACAGTACTACTATTACATCTTGTTATAAGATTGAACAATAGTACTATTACAGTACATGTTTCTTGGA
ATCTGATAAATAAAATTTTATACTTACCAAGCAAAAGCTCCACTTGATTCAGTTCACAAGTTATGACCGCTGATCAATGATAGATAGTTTTCATTCCAGA
CATAACCAACCACTGAAGATAGATAGATAGATGTTCATAAACCGGACCTCGACTCAAAGATAATTATTACATAAAAGGTAGTAGCAGCGTCGGAAATAGC
GAGTTTCAGGATCCATCATCAACGCGGCCGCGGCAGGGTAGTGTGGCTCTACTCGAAAGCCCACTGGTTCTCCCTGCGGATCTCCTCCTCCTCCTCGGCG
GTGAAGTCGTTCTTGATGTTGAAGGTCTTGCGGATCTCCTCGGGGGTCTTGCCCTTGATCATGTCGGCGACGGTCTGGCAGGTGAGGTCGAGCAGGCCCT
TGATGTTGAGGTAGTTGGCGGCGAGGATGAGGTCGAAGAGGGTGGCCTGGTCGACCTTGACGAACTCGGCGTCCCAGTTCTTGAGGTCCTCGGCGGGCGC
GGGCGGGGCGGCGGCGGAGGAGCTGGTGATCATCTTCTTG