Detailed information on CNT30137385


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222097Lolium perenneHordeum vulgare13.4830.9397.78180reverse complement
CNT30687453Lolium perenneTriticum urartu46.1411.5294.48616reverse complement

Expression of CNT30137385

Peptides detected in this lncRNA

>peptide 1 (43 aa)
PSFFSSMPISIILFSNPSVPSDLPHLLLGIDRAGVFSARMKCE*

>peptide 2 (58 aa)
MRGEINYMMETDGGAESERLWREAHVRCTTLETDASRCRPVRMLVIALRHNFVMGLSF*

>peptide 3 (30 aa)
KLFLIHAYQYNSIFQSECSIGLTPFASRDR*

>peptide 4 (98 aa)
MQKGELITLVCNLSLIDKGILLLVSFIFLLSVIFPVKSYLRKIDAAYVSALSDFAELNRIQAQKAGYVALHDLSFSWLRGVRMTVIPVHKRWKGKKGV*

Sequence

>CNT30137385
CCAAGCTTTTTCTCATCCATGCCTATCAGTATAATTCTATTTTCCAATCCGAGTGTTCCATCGGACTTACCCCATTTGCTTCTAGGGATAGATAGAGCTG
GAGTCTTCAGTGCTAGAATGAAATGTGAATGAGAGCATAGATTGATTGTCTCACTGCATGTACGTATAGTAACCGGTTAATAATACTCAGGGTCCCTAAT
ACTAATCTCGACATGAGAGGAACGTGCCCTCTCGGCCTTGATATATACTAACAAATATGGTTTTTTAACTCAGACATGAGAGGTGAGATCAATTATATGA
TGGAGACAGATGGAGGAGCAGAAAGTGAGAGATTGTGGCGTGAAGCACATGTAAGGTGTACAACTCTTGAGACGGATGCATCGAGGTGCCGGCCTGTGAG
AATGCTCGTCATAGCGTTGCGCCATAATTTTGTGATGGGTCTTTCGTTTTAAAAATAGGAGTTTTTCGGGTCTAGTTTACCGGTCCGTCAAGAAATGCGT
ATGAAAAGTGAAATAGTTGATGTGATGGATGTGCCTGGTATCGATCAATGAAACATCGGCTCGACGCAGGATTTCAATAGAACGAAAAACATCGTAAGTA
GTAGTAATTGAAAGCCCTGGGACTGCAACCGGAACTACCCGATCCGCTGAAATACGATACGAAGGAAGAAAGGTGCGACTCGTGGTCTCGATCATTTAAA
TGATCCTTTAGATTGGAAGATATGTTACACATTCGAGAATGGCGCTGTTGATCTAGTTAGGTTTGTAATTGTTTTGTGTTCAGTTCCGTTCTCCAAATCT
GCGTTTCGTGGGTAGAACCCACGCCAATATCATATTGACTCTCTCTCGTCCAATAAGAGAGTTACTTTATTCAAATTCTCTCCTTTCCAAAGCTCCATGA
TGGGGTAAATAAGGGGGAAGAGGAGTTGTCACGATAGACTAAAGAAATGCAAAAGGGGGAATTAATAACTTTGGTGTGTAATCTTTCCCTTATAGATAAG
GGTATCCTCCTTCTGGTTTCTTTTATTTTTCTTTTATCTGTCATTTTTCCAGTAAAAAGCTACTTGAGGAAGATAGATGCGGCGTACGTTTCGGCGCTCT
CTGATTTCGCTGAGCTAAATAGAATTCAGGCTCAGAAAGCAGGGTATGTGGCTCTCCACGATTTGTCATTCTCGTGGTTGAGAGGGGTAAGAATGACGGT
AATCCCTGTACATAAAAGATGGAAAGGGAAAAAAGGGGTCTGATTTTAAGACATCGAGCGCGCGGGATCTCGCTTTAAAAAAAACCTGTCGCGTCCACCA
TGGGCGCGAAAAGCACTTACGCGGATTAAGGAGGC