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Detailed information on CNT30137280


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3059659Lolium perenneArabidopsis lyrata19.2920.0587.3687forward
CNT30332479Lolium perenneDioscorea rotundata21.7334.6384.6998forward
CNT30149525Lolium perenneBrachypodium distachyon25.2837.7585.09114forward

Expression of CNT30137280

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGSSSLGLAVSWEAKMTLLAVGITWPPPL*

Sequence

>CNT30137280
CACCAAGAATTACTAGCGGACGACAGATACATAAATCTAAGTTTTAACATCTGTTACATCACGACAGACAGCAAAACATAGTCTCAGGCTCTCAGCCCAC
TACCAATACCACGACAGATAGTTCATTACGATACAAGACGACTCAATGAAAATAAAGCAGTTCTCATAGTAAGATAGAAAATGCAGCAAAACATGACCCC
AGAAACTTAGAGCTTGTCCTCGAAGTCAGAGAGAGGAGTCATCTGTTCCTTGAGCCCCTTCCTCTTGCGGATATCCTTGACGAGGTTGAAAGACTGGGAG
TCCACCTCCAGAGGATCAGAGTTCATCACTTCCCAATGGGCTCCAGCAGCCTTGGCTTAGCAGTGAGCTGGGAAGCGAAAATGACCCTCCTGGCGGTTGG
GATAACCTGGCCACCTCCCCTGTGAATGGCGTCAGTGTGGAGGACAACATC