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Detailed information on CNT30136937


BLAST search results

BLAST vs Swiss-Prot:
sp|A8Y9D1|RR7_LOLPR, E-value = 2e-63

BLAST vs NONCODE:
NONOSAT000698, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695659Lolium perenneOryza sativa91.7769.0596.72580forward
CNT30677883Lolium perenneSetaria viridis84.3435.7296.44533forward
CNT30617775Lolium perenneSesamum indicum79.1175.5387500forward
CNT30730546Lolium perenneCorchorus capsularis57.1261.0890.03361forward
CNT30198866Lolium perennePisum sativum38.2974.2388.02242forward
CNT30300194Lolium perenneTriticum aestivum91.7727.5796.72580forward
CNT30384007Lolium perenneTriticum turgidum63.4545.9398401forward
CNT30569656Lolium perenneActinidia chinensis67.7250.8390.19428forward
CNT30543269Lolium perenneBrassica napus78.9616.8690.18499forward
CNT30556129Lolium perenneOryza glaberrima21.8431.2990.58138reverse complement
CNT30598987Lolium perenneFraxinus excelsior24.375.1892.86154forward
CNT3018230Lolium perenneZea mays78.9669.0297.39499forward
CNT30607385Lolium perenneGossypium raimondii29.9117.985.71189forward
CNT30230544Lolium perenneAnanas comosus18.3523.9293.97116reverse complement
CNT30153780Lolium perennePrunus persica57.1240.3487.81361forward
CNT30331679Lolium perenneDioscorea rotundata68.9963.6591.06436forward
CNT30150659Lolium perenneBrachypodium distachyon34.9794.4490.95221forward
CNT30115844Lolium perenneOryza nivara91.7766.5996.72580forward
CNT30603929Lolium perenneOryza punctata26.7442.3691.72169reverse complement
CNT3049028Lolium perenneCucumis sativus27.6960.3490.86175forward

Expression of CNT30136937

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MAPPLPLAASTNSELNLKAIFRPGRFWDASNNQRMASALPCLDPISIGTFCVDPFLLRLVFTPILGVTLCIA*

>peptide 2 (39 aa)
MIYVFSFFCFLFVSRKILSDSPSIDIFSIEMYEPMCLHA*

>peptide 3 (46 aa)
MFSLSFAFCLFRERYCPILLLLIFFRSRCTNPCAYMPRFCSWINEN*

>peptide 4 (28 aa)
MLTNRLRKIGSDFAVLFSAVPRRDMSVKE

Sequence

>CNT30136937
GGCTTAGTTGATCATGATTTATGTTTTCTCTTTCTTTTGCTTTTTGTTTGTTTCGAGAAAGATATTGTCCGATTCTCCTTCTATTGATATTTTTTCGATC
GAGATGTACGAACCCATGTGCCTACATGCCTAGATTCTGTTCATGGATTAACGAAAACTAGCAAGAGCTCTATTTGCCTCTGCCATTCTATGAGTCGCTT
CCTTTTTGCGTATGGCACCCCCACTCCCTTTGGCAGCATCTACTAACTCGGAACTTAATTTGAAAGCCATATTTCGACCCGGACGCTTTTGGGATGCTTC
TAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAGATCCTATTTCAATCGGAACTTTCTGCGTCGATCCTTTTTTATTACGTCTTGTTTTTACTCCT
ATATTGGGAGTTACTCTATGTATTGCTTGACGTAAAACCAATAGTGGATTTGTTCTGTCTTTTGTTGAATCTTTTTCACGGCTCGATAGAAAATTTGATA
AGCCAATGATTTTTTTCCGTCTTTCATAATACGGTTAACCACCATGTTAACTAATCGATTACGAAAAATAGGATCGGATTTTGCAGTTCTTTTTTCTGCA
GTACCTCGACGTGACATGAGCGTGAAAGAGGT