Detailed information on CNT30136898


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697881Lolium perenneOryza sativa28.2223.6188.2468forward
CNT30371396Lolium perenneOryza glumipatula22.417.8888.8954forward
CNT30104684Lolium perenneOryza rufipogon22.4117.788.8954forward
CNT30118058Lolium perenneOryza nivara22.4110.1188.8954forward
CNT30593112Lolium perenneEragrostis curvula22.8218.5287.2755forward

Expression of CNT30136898

Peptides detected in this lncRNA

>peptide 1 (68 aa)
LVAVGGHADGEGHGMHGASDDPTWPHVTAADASPAAISTTTNAARARKAVALLLAAIDDLTRSISLRC*

>peptide 2 (53 aa)
LLQSVDMLMGKGTGCTARATIPPGRTSPPPTLPPPPSAPPQTPPGPGRRWPCC*

Sequence

>CNT30136898
CTTGTTGCAGTCGGTGGACATGCTGATGGGGAAGGGCACGGGATGCACGGCGCGAGCGACGATCCCACCTGGCCGCACGTCACCGCCGCCGACGCTTCCC
CCGCCGCCATCAGCACCACCACAAACGCCGCCAGGGCCAGGAAGGCGGTGGCCTTGCTGCTAGCCGCCATCGATGATCTGACGAGATCGATTTCTCTGCG
TTGCTAAGTGAGTGTACTGGCGTACGTTGGTGGAAGAGAGG