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Detailed information on CNT30136353


BLAST search results

BLAST vs Swiss-Prot:
sp|A2XFI3|PDC2_ORYSI, E-value = 2e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522505Lolium perenneSetaria italica25.476096.1231forward
CNT30562761Lolium perenneActinidia chinensis24.4820.0588.74222forward
CNT30362074Lolium perenneSorghum bicolor29.7747.9694.44270forward
CNT30101892Lolium perenneOryza rufipogon38.5957.1991.43350forward

Expression of CNT30136353

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLIYTGLLSLSAVAIAVSICSCASSKLVTTA*

>peptide 2 (55 aa)
MIGHPGADAGQPTAPFTAAGDGLSTGTMRASIAASGGGGGAAEQRPRCVGVWGIF*

Sequence

>CNT30136353
GAGAAATAGTACTTGGGGGCGAGGAACAAGGGGACTGGATCCGGGGTAAAGGTGGGATGCAGTAGCCCGGGGAGATTGCAGCTGATGCTGATATACACGG
GCTTGCTCTCCCTGAGCGCCGTGGCAATCGCGGTGTCGATCTGCTCGTGTGCGTCGTCCAAATTGGTGACCACAGCCTGAATGAATTTAGGAACCAACGA
GATCAAGAGCCGCTCCTGAAGCCCAACTAGTTATTACAGCAATCAGGGACGACGCAAATGGTTGAAGAAAGAATACCTGGTAGCAAGTGACGGTCTGGAA
GCAGCGGAGCTCCTGGGAGAAGTCGGGGACGCCGATGGTGTGGTGGAGGATGCGGTTGGTGCCGTAGTCGTTGGAGTTGGGCCCGCCGGCGATGCAGATG
ACGGGGAGGTTCTCGCTGTAGGCGCCCGCGATGGCGTTGAGCACGCTGAGGCCGCCGACGGTGAAGGTGACGGCGCATGCGCCCACGCCGCGGGCGCGCG
CGTAGCCGTCGGCCGCGTACCCGGCGTTGAGCTCGTTGCAGCAGCCGACGAGGCGCAGGCCGGGCTCGGCGACGAGGTGGTCGAGCAGCGTGAGGTTGAA
GTCGCCGGGGACGGCGAAGACGTCGCCGACGCCGACCTGCACGAGGCGGCGCGCGAGGTGGCGCCCCAGCGACGCCGCACCGGCCGCGAGAGGCGCGGGG
TGGGAGGACATGATCGGGCACCCCGGCGCCGACGCCGGGCAGCCCACCGCGCCGTTCACCGCCGCCGGGGACGGCCTGTCGACGGGGACGATGCGGGCGT
CCATCGCGGCGAGTGGTGGTGGCGGTGGAGCGGCGGAGCAGAGACCTCGGTGTGTGGGGGTTTGGGGAATATTCTAGGACTCGCTGGAGATTTTGGTTTG
ACGTGTG