Detailed information on CNT30136282


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376000Lolium perenneArabidopsis thaliana14.1320.8692.3178forward
CNT30224947Lolium perenneHordeum vulgare16.8531.6397.8593forward
CNT30395161Lolium perenneTriticum turgidum16.6725.8497.8392forward
CNT30247625Lolium perenneAvena sativa41.6753.7486.96230forward
CNT30309894Lolium perenneCamelina sativa14.1337.3292.3178forward
CNT30722009Lolium perenneTriticum spelta16.8522.297.8593forward
CNT30581427Lolium perenneEchinochloa crusgalli15.5820.6794.1986forward
CNT30499286Lolium perenneDigitaria exilis15.5820.4891.8686forward

Expression of CNT30136282

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MFLFLDRMHLELVLFILPCSCLMPSYCYLRSELIVIVVSCVSKLVFR

Sequence

>CNT30136282
GTCCAACTCGGCTAGGGTTTGCGTTTTCCAGCAACCGAGCCCTATAAGTACGAGGCGGCAGCCCTCGCAGCCATCCATCTACTGAGATCGAGATCTTCCA
CACACCGCCGCCGCAGCAAACCGGAGAGCGAGACCTACTGAGCGCACCGCACCGCCGCCGAGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCT
CAAGAGGAAGCGCCGAAAGATGAGGCAGCGATCCAAGTAGGCTGCTTCGAGAAGAGGAAGCATCTTCTAACATCTGGCAGCTAGACGTTGAGGGATGATG
GCATCGTGGTCTAATGATTCCTGATCTGTTCTGTAGTTTATGGTTGTGGAATATGTTTACCTGTGTTTGTTTCAAATATAAGACTAAGTTATTGTAATGT
GAGGATTTTATATGTTTCTGTTTCTTGATCGTATGCACTTGGAGCTTGTTCTGTTTATTTTGCCATGTTCTTGTTTGATGCCCAGCTACTGCTATCTTCG
ATCTGAATTGATAGTGATTGTGGTTTCTTGTGTGAGCAAACTTGTGTTTCGG