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Detailed information on CNT30136123


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223084Lolium perenneHordeum vulgare85.2459.2385.93462forward
CNT30237226Lolium perenneBrassica oleracea21.0325.1785.09114forward
CNT30439071Lolium perenneAegilops tauschii16.9727.5495.6592forward
CNT30255936Lolium perenneAvena sativa39.8558.790.74216forward
CNT30662744Lolium perenneTriticum dicoccoides23.824.1693.8129forward
CNT30462400Lolium perenneSaccharum spontaneum22.328.8992.56121forward
CNT30610723Lolium perenneGossypium raimondii21.0322.0981.58114forward
CNT30217653Lolium perenneKalanchoe fedtschenkoi17.1635.6390.3293forward
CNT30345068Lolium perenneEragrostis tef23.0613.9892.8125forward
CNT30365623Lolium perenneSorghum bicolor45.0221.8686.48244forward
CNT30481517Lolium perenneChara braunii20.6637.0986.61112forward
CNT30150970Lolium perenneBrachypodium distachyon25.2856.8593.43137forward
CNT30334895Lolium perenneCynara cardunculus16.9722.682.6192forward

Expression of CNT30136123

Peptides detected in this lncRNA

>peptide 1 (37 aa)
QDSFKKKYHVQNRLTEIVHTEAKEMQQCSRKMMRVQQ*

>peptide 2 (72 aa)
MPSLAAAASPSLVYLPSCARELALARSRSASCAAATCSGAPERRRKIRATGSATGSSRSGSASPPPLTDRQTR

Sequence

>CNT30136123
CGCAGGATTCTTTTAAAAAAAAATACCACGTTCAAAACCGTCTGACTGAGATTGTTCATACAGAGGCAAAAGAAATGCAGCAGTGCTCTAGAAAAATGAT
GCGAGTACAGCAGTAAAACCATTCCAAGTTCTTTACTTAGGGTGGTAATAAACACAGTATACTTTCTGTCCATCTCTCAATCGGAGCTGGTCTCGATCTG
TAACAACGACGACACACTGGCTACAGTGCCTCAAGCTGCTCAAGGCGCTACTAGCACTCTCTCCATAGGTAGATAAGATAGCAGCCGGCCAATGGATCAG
TAGCTGTAGTTCTTGACGAACATGCCCTCCTTGGCGGCCGCGGCCTCGCCGTCGCTGGTGTACTTGCCGAGCTGCGCCAGGGAGTTGGCCTTGGCGCGCA
GCAGAAGCGCCTCCTGTGCCGCCGCGACGTGTTCTGGAGCGCCCGAGCGTAGGAGAAAGATACGTGCCACGGGTTCGGCGACTGGTTCATCGCGTTCAGG
TTCAGCGTCGCCTCCACCTCTGACTGACCGCCAGACAAGAAC