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Detailed information on CNT30135940


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549654Lolium perenneIpomoea triloba23.683586.51126forward
CNT30375250Lolium perenneArabidopsis thaliana23.530.2780.8125forward
CNT30524797Lolium perennePhaseolus vulgaris21.2416.2184.96113forward
CNT30628402Lolium perenneVigna unguiculata23.3114.6983.87124forward
CNT30712600Lolium perenneGlycine max33.4623.8684.27178forward
CNT3042438Lolium perennePrunus dulcis23.6815.3186.51126forward
CNT30178846Lolium perenneSecale cereale29.5117.6282.17157forward
CNT30223457Lolium perenneHordeum vulgare27.6349.3394.56147forward
CNT3084637Lolium perenneVigna radiata21.249.8284.96113forward
CNT30542059Lolium perenneBrassica napus28.0118.6783.22149forward
CNT30239005Lolium perenneBrassica oleracea27.8214.8183.11148forward
CNT30552975Lolium perenneOryza glaberrima32.713091.95174forward
CNT30721484Lolium perenneTriticum spelta21.815.8798.28116forward
CNT30154895Lolium perennePrunus persica20.1114.1785.05107forward
CNT30706772Lolium perennePrunus avium23.6835.986.51126forward
CNT30331344Lolium perenneDioscorea rotundata21.9917.2383.76117forward
CNT30579360Lolium perenneEchinochloa crusgalli38.3533.6193.14204forward
CNT30113801Lolium perenneFicus carica37.0347.785.79197forward

Expression of CNT30135940

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MHSFYISKLIDDMGSRYHISTVYSSRHHRLTDRLIEMIQSKLTRRSRN*

>peptide 2 (45 aa)
MLPPRKAPKVTAGFTCPPEMLAPTDTATNRAKACAMAAAISPIGAS

Sequence

>CNT30135940
GTAACTTGAGACTTGGAACTGAACTGAACTTGAAAATACACCGGGCGAATGCACAGTTTTTACATAAGCAAATTGATTGATGACATGGGTTCCAGATACC
ATATATCCACGGTTTACAGCTCAAGGCACCACAGACTCACTGACCGACTGATCGAAATGATTCAAAGCAAATTAACGAGGCGATCGAGGAACTAAAAGGA
ACGATTCATGCATGCGATGGAAGCGGTAGGTCGATCTTCACACGACGAACGGAAGGAAGGGAGCCACGGACCAAGCTGGTTGGCTTAGTAGTCGCCGGTG
GGGAGCCCGCCGGTGGCGAAGCGGAGGAGGAAGCAGGCGGCGGTGGAGCCGAGAAGCTGGGCGATCCAGTAGAGCAGGCCGCGGAAGAGGGTGATGTTGC
CGCCCAGGAAGGCGCCGAAGGTCACGGCCGGGTTCACGTGCCCGCCCGAGATGTTGGCGCCCACGGACACCGCCACGAACAGGGCGAAGGCGTGCGCGAT
GGCCGCCGCGATCAGCCCGATCGGGGCGTCCG