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Detailed information on CNT30135921


BLAST search results

BLAST vs Swiss-Prot:
sp|P33628|TBA_PICAB, E-value = 9e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677979Lolium perenneSetaria viridis53.9921.3994.58203forward
CNT30522084Lolium perenneSetaria italica27.1333.4496.08102forward
CNT30317272Lolium perenneCorylus avellana48.6747.0486.34183forward
CNT30372848Lolium perenneArabidopsis thaliana26.616.6790100forward
CNT30493173Lolium perenneOlea europaea37.7734.3883.1142forward
CNT30300679Lolium perenneTriticum aestivum50.2787.186.24189forward
CNT30383102Lolium perenneTriticum turgidum39.8951.1994150forward
CNT30562914Lolium perenneActinidia chinensis44.4154.9381.44167forward
CNT30555317Lolium perenneOryza glaberrima35.947.291.11135forward
CNT3079816Lolium perenneBrassica juncea2534.1889.3694forward
CNT30446069Lolium perenneSaccharum spontaneum46.817.7681.25176forward
CNT3065Lolium perenneZea mays53.7282.7993.07202forward
CNT30609153Lolium perenneGossypium raimondii48.9445.4386.41184forward
CNT30648424Lolium perenneRosa chinensis49.257.6389.19185forward
CNT30129276Lolium perenneCorymbia citriodora48.443.5490.11182forward
CNT30716299Lolium perenneMalus domestica golden52.3932.4589.34197forward
CNT30719750Lolium perenneTriticum spelta53.9985.2993.1203forward
CNT30595858Lolium perenneOryza meridionalis25.88.7292.7897forward
CNT30359416Lolium perenneLactuca sativa49.225.8779.46185forward
CNT3024647Lolium perennePopulus trichocarpa39.128.3887.07147forward
CNT30331462Lolium perenneDioscorea rotundata52.3938.3381.22197forward
CNT30579614Lolium perenneEchinochloa crusgalli52.9350.3892.46199forward
CNT30496537Lolium perenneDigitaria exilis34.5757.5286.92130forward

Expression of CNT30135921

Peptides detected in this lncRNA

>peptide 1 (98 aa)
VVTAGKVVGCILLATDELLRVEELAVSTSPHLVNDSGLEVNKDSTGNVLPSTSLAEEGVESIITSPNSVADLDAGLADVDRDALPHGGGGWLLRCRRS*

>peptide 2 (90 aa)
MTVGSRSTKTARGTCFPAPVSLKKVLKASSPPPTALPTWMPAWPMWIEMHSLMVAVVGYFAADEVEEGGGRGRLKLGGAERGEYEDACPCG

Sequence

>CNT30135921
GTGTAGTGACCGCGGGCAAAGTTGTTGGCTGCATCCTCCTTGCCACTGATGAGCTGCTCAGGGTGGAAGAGCTGGCGGTAAGTACCAGTCCTCACCTCGT
CAATGACAGTGGGCTCGAGGTCAACAAAGACAGCACGGGGAACGTGCTTCCCAGCACCAGTCTCGCTGAAGAAGGTGTTGAAAGCATCATCACCTCCCCC
AACAGCGTTGCCGACCTGGATGCCGGCCTGGCCGATGTGGATCGAGATGCACTCCCTCATGGTGGCGGTGGTTGGCTACTTCGCTGCCGACGAAGTTGAG
GAGGGTGGGGGAAGGGGAAGGCTCAAGCTCGGAGGCGCGGAGAGAGGCGAGTACGAAGACGCCTGTCCCTGCGGTG