Detailed information on CNT30135654


BLAST search results

BLAST vs Swiss-Prot:
sp|P00871|RBS1_WHEAT, E-value = 5e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672859Lolium perenneSetaria viridis20.2819.2895.3543forward
CNT30221053Lolium perenneHordeum vulgare37.261191.1479forward
CNT30657835Lolium perenneTriticum dicoccoides36.3227.690.9177forward
CNT3067646Lolium perenneLeersia perrieri20.7521.3690.9144forward
CNT30681536Lolium perenneTriticum urartu35.8532.4890.7976forward
CNT30104556Lolium perenneOryza rufipogon35.3827.4786.6775forward

Expression of CNT30135654

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MHLILPPLLTLPRPAVDLRPWKGATEVADEAITAGAMVLSIIAKERMR*

Sequence

>CNT30135654
GGCTGACAAGATAACATGGTAGGCTACATGTTTCCTTCAGAATAACCATACCTGCATGCACCTAATCCTTCCGCCGTTGCTGACGCTGCCGAGGCCAGCG
GTGGACTTGAGGCCCTGGAAGGGCGCGACGGAGGTGGCTGACGAAGCCATCACCGCGGGGGCCATGGTGCTAAGTATTATTGCTAAGGAGAGAATGAGAT
AACTAGCTGGGC