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Detailed information on CNT30135064


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673014Lolium perenneSetaria viridis49.3950.989.72282forward
CNT30520920Lolium perenneSetaria italica49.3940.6989.72282forward
CNT30516978Lolium perenneJuglans regia33.828.380.83193forward
CNT30698134Lolium perenneQuercus lobata29.69.0780.47169forward
CNT30629841Lolium perenneVigna unguiculata21.0220.5180.83120forward
CNT30710020Lolium perenneGlycine max31.739.4381.22181forward
CNT30182270Lolium perenneSecale cereale27.6728.6294.3158forward
CNT30292897Lolium perenneTriticum aestivum47.6446.1888.97272forward
CNT30222663Lolium perenneHordeum vulgare27.1530.6392.9155forward
CNT30390478Lolium perenneTriticum turgidum47.6422.8288.97272forward
CNT3084834Lolium perenneVigna radiata19.2628.5782.73110forward
CNT30438727Lolium perenneAegilops tauschii28.0250.6390160forward
CNT30249726Lolium perenneAvena sativa49.3935.1687.59282forward
CNT30662078Lolium perenneTriticum dicoccoides21.8943.187.2125forward
CNT30454500Lolium perenneSaccharum spontaneum34.8554.9787.94199forward
CNT3014188Lolium perenneZea mays49.2136.7888.97281forward
CNT30720963Lolium perenneTriticum spelta47.6448.8388.97272forward
CNT30344813Lolium perenneEragrostis tef47.1151.4391.08269forward
CNT30620323Lolium perenneCajanus cajan32.0510.2480.33183forward
CNT3037519Lolium perenneCucumis melo21.3711.883.61122forward
CNT30104607Lolium perenneOryza rufipogon16.9927.0293.8197forward
CNT30578384Lolium perenneOryza barthii22.7733.1692.31130forward
CNT30582394Lolium perenneEchinochloa crusgalli3147.4589.83177forward
CNT30604850Lolium perenneOryza punctata27.3216.0788.46156forward
CNT30557050Lolium perennePanicum hallii27.8541.8491.82159forward
CNT30551896Lolium perenneOryza brachyantha49.2142.3890.75281forward
CNT30112090Lolium perenneFicus carica26.977.5284.42154forward
CNT3040359Lolium perenneMarchantia polymorpha22.5917.2282.17129forward

Expression of CNT30135064

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MAPETPPKKNPPVNCAHPSAVCSLSASFLRPVRVSEGAVEGAPSSKEATPYMVRTTLRMVTSPTAPSAPAWPCTGV

Sequence

>CNT30135064
GCTGGGATAAATTCTTAATCATTGTCCTTAATTGAGTGTTGATTAGGTATCTAGTAGTTATAAAGACGGTGGACCTTCAGGCACAAGATGTGAAGTTGAG
TGAGTAGTTCTGTTAGCTTCTAGTGTGGTTGCCAACCTTAATTTGTTGAGCAACACAAATCATCAACATGCAATCGGGAAATTAACACGTACTTTGTTGC
CATGTTAAAATAGTACCGTACCATCCATGCATCGGAAGATTGATCGTGCGGAACAAATTCATTTACACGTACACAGACTCAAACAAGCATCTACTTGAAG
AAGTATGGGAGGTCGAGGACGTAGAGGAGGAAGTAGGCCCAGATGGCGCCGGAGACGCCGCCGAAGAAGAACCCGCCGGTGAACTGCGCCCACCCTTCGG
CGGTCTGCAGCTTGTCGGCCTCCTTCTTGCGGCCCGTGAGGGTGAGCGAGGGGGCGGTGGAGGGCGCGCCCTCGTCGAAGGAGGCGACGCCGTACATGGT
GAGGACGACGCTGAGGATGGTGACGAGCCCCACGGCGCCGAGCGCGCCGGCCTGGCCGTGTACGGGCGTGT