Detailed information on CNT30134753


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30342903Lolium perenneEragrostis tef78.3317.5189.31159forward
CNT30369442Lolium perenneOryza glumipatula68.9713.3385140forward
CNT30106351Lolium perenneOryza longistaminata68.9734.0687.14140forward

Expression of CNT30134753

Peptides detected in this lncRNA

>peptide 1 (31 aa)
LAPYYFCVYSTQLLCRSCFTIREPAFVCHPK*

>peptide 2 (45 aa)
FGSVLFLCLFYTAIVSKLLHHTRTGFCLPSKMIGITAYSCPCHFL*

>peptide 3 (63 aa)
WLRIIFVFILHSYCVEAASPYENRLLSAIQNDRYYCLLVPLSLPVIIVAVYLHWLSMKIFKHA*

Sequence

>CNT30134753
TTTGGCTCCGTATTATTTTTGTGTTTATTCTACACAGCTATTGTGTCGAAGCTGCTTCACCATACGAGAACCGGCTTTTGTCTGCCATCCAAAATGATAG
GTATTACTGCCTACTCGTGCCCTTGTCACTTCCTGTGATAATTGTGGCAGTCTATCTGCATTGGCTAAGCATGAAGATTTTCAAGCACGCGTGAAGCTAG
GAC