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Detailed information on CNT30134722


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30459719Lolium perenneSaccharum spontaneum3.826.2987.8866reverse complement

Expression of CNT30134722

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLDMLQKNVGKRCNIFVNIRYAEKNITFKIIF

>peptide 2 (32 aa)
MRLGAPDQGADEVKGPSSSRWAQTRGDHPNTG*

>peptide 3 (35 aa)
MELGFREQKSLFLPAVATAGSLVSLPTRYIFSVAS*

>peptide 4 (42 aa)
LKRTSPSLSLLRRRRRLLLALARPRSPATSGERGASTPLPLL*

Sequence

>CNT30134722
CCCTAAAACGCACTAGCCCCTCTCTGTCTCTATTGCGGCGGCGCCGCCGATTGCTGCTCGCGCTCGCGCGGCCAAGATCGCCGGCGACGAGTGGAGAGCG
GGGCGCTTCCACCCCCTTACCACTTCTTTGACCCTCTGCAAGGTCTCGGCTGCGCGGCGGAGACGACGCCTCCCGCGCACGCCCCAGCCAGCGTCTTGCC
GGCGACGAGACGCCCTTCTCTATTGCCTCCCTCTAGCCACCTAAGAACCGGCGGCCTCACAACGGTGGAGACAAGCGGCGGCGCCCCCTGCTCCTCTTGC
CGGTGTGTTCGTCCACCTGAGCGGTAGGCGCACCACCGTCAAACGGCGCAGAGGAGGTGCCAAAATAGAACCCAGTTGCTGTTCCTTGCCCCGGTGAAGG
GGTGCTGTTCCTTCGCCGTCGAGCCCGAGGGCCGACCGGCGAGCTTTCTTTTCCTTTCTTTGCCAGCGACCGTGAGCAGCAACAGTCGGTGGGGGTGGGC
TTTTCCTTTCTTTGCCGGTGAGCCCGAGGCTCTGCCCGGTGAGCAATTACTTTTCCCCTTTCGGATTCGATCTAGGGTTAGGGTTTGGGGATGAATTAGT
TCTGTTTTTTTCTTTTTCTTTACTGTCCCGATCACAAGATCTAAGGCCCTAGTGGCTCTGATACCAATGTTATACTTGCTGGATCGACTAGGGTAGATCA
TGGCCGGGTAGGAGAGGGGTACTGTCAGTTTACCTTCTCCATTGGAGGTGGAGCTCACCGATCTGGACATGGCGGCGACGGCGACGGCGTGAGGTGGTGG
CGGAGCTTCCCGTCGGCACTGTGCGAACCCTAATCGGTGGGTGTGTTGGTGGGGCGAGTGGCACTCCGGTCAACCTTGTAACGTGTGCCACCGCCCCCAC
CACTGTATATATAGCACAGGCGACAGGGGCCCACCAACTAGATGCGGTTGGGCGCCCCCGATCAGGGCGCAGACGAGGTCAAGGGTCCGAGTTCGAGCCG
TTGGGCTCAGACGCGAGGAGATCATCCTAACACAGGATAGTTAGTTGCTTCCGTCGGGGAGGCGTGCCCCGAGCCGGCCGGTGGCAAACTTGATTGGGCC
TTAATTTGATGGAACTAGGCTTTAGGGAACAGAAAAGTCTATTCCTGCCGGCTGTAGCTACAGCCGGTTCACTCGTCTCTCTCCCCACACGATATATTTT
CTCCGTCGCTAGCTGATACATCTGCCGCAACCACTCCTCCCCTAAGGACGTCGCAGCTGAATACCAAGGGCCGCCCACCTGCTCCTCCGCGCGAGATCCG
CTGTTGGGGCGCCGGAGCTCCTACACGTGCCAGACGCTAGAGCTCCTCCGTGTGAGGGCGCGCCGTCCAGCTCCCTCCGGTGTGCCACCCATCCGCCCCT
GACCTAGCTCCTCTGTGAGCCCGCCCTGCCCCTTTCTCCTCCATCGCCGGTCGCGGTCATAAGCAGGGACGGAACCAGGAATACAAGACAAGGGGGGCTA
AATGTACATCACAAATTTTAAAGGGTTTTTTTAGGAAAAAAAATAATCATAGGGGGGCCATGGCCCCAGCCTGCCCCCCACTGGCTCCGTTGTTGGAAAT
GTTACATGTGTATCTCTGTAATGTTGGATAATTCAGGAAAAAATGTTGGATATGTTACAGAAAAATGTTGGAAAACGATGTAACATTTTTGTAAATATTA
GATACGCAGAAAAAAATATTACATTCAAGATTATTTTTG