Detailed information on CNT30134237


BLAST search results

BLAST vs Swiss-Prot:
sp|O22914|CP121_ARATH, E-value = 2e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674439Lolium perenneSetaria viridis20.5154.8991.47129forward
CNT30523223Lolium perenneSetaria italica23.3729.5292.52147forward
CNT30515591Lolium perenneJuglans regia22.2626.9780.71140forward
CNT30617555Lolium perenneSesamum indicum20.3521.2684.38128forward
CNT30710175Lolium perenneGlycine max18.9230.0584.03119forward
CNT30290105Lolium perenneTriticum aestivum33.8646.9292.96213forward
CNT30387749Lolium perenneTriticum turgidum3837.5293.72239forward
CNT30586289Lolium perenneMusa acuminata16.6936.9791.43105forward
CNT30246479Lolium perenneAvena sativa39.7537.5993.6250forward
CNT30659185Lolium perenneTriticum dicoccoides3844.8493.31239forward
CNT3015512Lolium perenneZea mays36.8826.9883.19232forward
CNT30216686Lolium perenneKalanchoe fedtschenkoi33.8637.1183.57213forward
CNT30654798Lolium perenneRosa chinensis19.0823.0385.83120forward
CNT30620908Lolium perenneCajanus cajan21.318.8788.06134forward
CNT30580422Lolium perenneEchinochloa crusgalli35.4533.2385.65223forward
CNT30497736Lolium perenneDigitaria exilis36.413385.15229forward
CNT30557621Lolium perennePanicum hallii34.9840.0787.27220forward

Expression of CNT30134237

Peptides detected in this lncRNA

>peptide 1 (74 aa)
TYHTNMIIHIIIFNYIQGIATTEVEKTQNHGAYSPGKNLDFFLFTPLQVSFLFLCDQRPLQVWILSSSLVEQIN*

>peptide 2 (36 aa)
NISYKYDYSYNHFQLHTGNSNNRGGENTESWCIFTG*

>peptide 3 (39 aa)
MVHIHRVKTLISFFSLPSKYHFFSCVISDLFKYGSYLPV*

>peptide 4 (68 aa)
MLSDTLSEIPGGATTRLTAGNVTRAGPCGLARTSPRAAAAKVDRLTFVSADAITAAASSSVDMRFLWLS

Sequence

>CNT30134237
AACATATCATACAAATATGATTATTCATATAATCATTTTCAATTACATACAGGGAATAGCAACAACAGAGGTGGAGAAAACACAGAATCATGGTGCATAT
TCACCGGGTAAAAACCTTGATTTCTTTCTTTTCACTCCCCTCCAAGTATCATTTCTTTTCTTGTGTGATCAGCGACCTCTTCAAGTATGGATCTTATCTT
CCAGTCTAGTAGAACAAATTAATTAACACGTACGCTCAGCTGTCGTAGGTGCGGCACTCGTCGGTCTCCGGGTTCTCCTTGCAGTAGTTCTCGAGCGGGT
CGGAATCCTTGAGCTTGTCGCGGGCGTGGCTGGCCGCGGCGCTGAGTTCCTCCACCTCGTCCCACGCCGCCGCGCACTCCCCGCTGGCGCTGTCGTCCGA
GCACGCCTCCTGGGCATCCTTGATGCTCTCCGACACCTTGTCCGAGATACCCGGCGGCGCCACGACGCGGCTCACCGCCGGGAACGTGACACGGGCGGGG
CCCTGCGGCCTCGCGAGGACGTCGCCACGGGCCGCGGCCGCGAAGGTAGACAGGCTCACGTTCGTCAGCGCAGACGCCATTACAGCAGCAGCTAGCTCGT
CGGTCGATATGAGATTTTTGTGGTTAAGC