Detailed information on CNT30134231


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30470204Lolium perenneSaccharum spontaneum37.6916.3483.17101forward
CNT30705730Lolium perennePrunus avium54.130.2780.69145forward
CNT3022274Lolium perennePopulus trichocarpa54.129.7782.07145forward
CNT30148362Lolium perenneBrachypodium distachyon29.859.6688.7580forward
CNT3099734Lolium perenneOryza rufipogon89.1833.3887.03239forward

Expression of CNT30134231

Peptides detected in this lncRNA

>peptide 1 (88 aa)
RWPGRSCSRSSLEYMSQYFSAILFTFWMHSGLSGCSYHSAIRKPWIWPRAGCLVARWYGWKAPMAISESRAPSIDLWLMLADPMMMYSS

>peptide 2 (87 aa)
VAGEVLLQVVAGVYVPVLLRDLIHLLDALGALRVLVPQRHPEAVDLAAGRLPGCQVVRLEGTHGDLGVTGAVHRPLVDVGRPDDDVLV

>peptide 3 (77 aa)
GGRGGPAPGRRWSICPSTSPRSYSPSGCTRGSPGARTTAPSGSRGSGRGQAAWLPGGTAGRHPWRSRSHGRRPSTSG*

Sequence

>CNT30134231
AGGTGGCCGGGGAGGTCCTGCTCCAGGTCGTCGCTGGAGTATATGTCCCAGTACTTCTCCGCGATCTTATTCACCTTCTGGATGCACTCGGGGCTCTCCG
GGTGCTCGTACCACAGCGCCATCCGGAAGCCGTGGATCTGGCCGCGGGCAGGCTGCCTGGTTGCCAGGTGGTACGGCTGGAAGGCACCCATGGCGATCTC
GGAGTCACGGGCGCCGTCCATCGACCTCTGGTTGATGTTGGCAGACCCGATGATGATGTACTCGTCAT