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Detailed information on CNT30134105


BLAST search results

BLAST vs Swiss-Prot:
sp|P09144|PSAB_CHLRE, E-value = 4e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678731Lolium perenneSetaria viridis17.5357.2795.43197forward
CNT30248189Lolium perenneAvena sativa24.5619.4585.14276reverse complement
CNT3057627Lolium perenneAmborella trichopoda16.7333.1693.09188forward

Expression of CNT30134105

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MRALPRRLLYVLALYGRRGLAGCFGQVTVLCNHLIFFSSGLPVN*

>peptide 2 (37 aa)
MLLYQDNIVVTILKHLILDKVLQQCPEYKQNRKEVQNH

Sequence

>CNT30134105
AACATGGAGCGCTTCCATAGTTATAGTTAATTAATAATGATACATATTTTACCTCTGCTAGAACTGGCCTGGGAACATTCTTGCAAGTTAAGGAAAGCAC
ATGAATAGTATAGTGTTGGATTGCATGCTCAAGACTTGCAAGGATAGCTGTCAGTTAAACTTTATATTTGGGTACAAGACATGAACTTATATTAACTGGC
AAAAGATACTATGCGACTGAACAAAAGTCCCAAAAGGATTATATCCATTGATAAGTTGTGAAGAGTTTAACCATAAGTAATCTCTTAACCATCCCATCAA
ATAAGTGGAAGATTCATTAAATTGTGAAACGTTGCCCTGCCATAATGTGATATGTTTCCAATGCCAATAAAAAGTAACCCATCCAATGGTATTTAACATC
CAGAAAACTGCCAAATAAAACGCGGTTTCCAATGGGGATTTCAGAAAACAAATTCTAGCCTTCACAAGTGAAAGAAACTAGGTGAAAATGCGCGCTTTAC
CGCGCCGCCTACTGTACGTTTTGGCATTGTATGGTAGGCGTGGACTTGCAGGTTGTTTTGGCCAAGTCACTGTCCTTTGCAACCACCTTATTTTTTTTAG
CTCAGGGCTACCCGTAAACTAAAGATTAAGCACACTCCTCCACGCATGCTAACATGGAGGAATACATCACAAACAAAGAAGACATATTAAAGACACAAAT
TGAAGAGAGAGCAGATCATGAAAGTTAGTAAGACAATCTGCCTTTAGAGCATCTCTAGCACCCTTGTACTAAACCCTTAAAAATCAAGAGCAAGGTTGAA
GAACCTACTGACCGAACTACATCATGAGTTTACAATAGGACCATGAGAGTGGGAAAAGGACAATTTATATTCTAACTGAAACAATAAAAATAAATGAAGC
AGGTAACATAGGAGTACTGTTTTTTGGAAGCTGAGCAATGTTAGAAACTCCACTAAGCTCATAGGAAAATAACATGTTGACTAAAAGAAGCAAATAAATC
ATTGTTTACATGCTCCTCTACCAAGACAATATTGTTGTTACCATCCTGAAGCACCTCATCCTTGATAAAGTCCTTCAACAATGCCCTGAATATAAACAAA
ATAGAAAGGAAGTTCAGAACCACA