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Detailed information on CNT30134072


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 1e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Lolium perenneSetaria italica54.9653.285.71399forward
CNT30316147Lolium perenneCorylus avellana31.1330.3486.28226forward
CNT30703138Lolium perenneQuercus lobata30.8542.7583.93224forward
CNT30500451Lolium perenneCoffea canephora20.9414.2581.58152forward
CNT30615836Lolium perenneSesamum indicum17.2232.6484125forward
CNT3021362Lolium perenneCitrullus lanatus24.7927.6581.11180forward
CNT30504948Lolium perenneNicotiana attenuata15.1526.1983.64110forward
CNT30636701Lolium perenneCapsicum annuum14.0524.8286.27102forward
CNT3098150Lolium perenneSolanum tuberosum15.2922.6585.59111forward
CNT30182233Lolium perenneSecale cereale54.9664.1594.49399forward
CNT30222279Lolium perenneHordeum vulgare41.0598.6894.63298forward
CNT30590847Lolium perenneMusa acuminata46.4273.7482.49337forward
CNT30511842Lolium perenneSolanum lycopersicum15.2924.2484.68111forward
CNT30143836Lolium perenneMedicago truncatula21.7627.183.54158forward
CNT30246244Lolium perenneAvena sativa54.9649.0295.74399forward
CNT30661043Lolium perenneTriticum dicoccoides30.359.7896.82220forward
CNT30457014Lolium perenneSaccharum spontaneum54.9652.2391.73399forward
CNT3066796Lolium perenneLeersia perrieri52.8998.7191.93384forward
CNT30338563Lolium perenneEragrostis tef54.4195.4189.87395forward
CNT30363710Lolium perenneSorghum bicolor31.438.8486.84228forward
CNT30595456Lolium perenneOryza meridionalis54.4169.391.9395forward
CNT30358465Lolium perenneLactuca sativa29.4820.5279.44214forward
CNT30424172Lolium perennePapaver somniferum21.7622.6486.08158forward
CNT3054595Lolium perenneAmborella trichopoda20.1170.5382.19146forward
CNT30325711Lolium perenneAsparagus officinalis35.480.5685.6257forward
CNT30102778Lolium perenneOryza rufipogon7.8522.5387.7257forward
CNT30580107Lolium perenneEchinochloa crusgalli54.9676.8892.73399forward
CNT30497454Lolium perenneDigitaria exilis51.2410093.01372forward
CNT30594668Lolium perenneEragrostis curvula43.1192.8892.01313forward
CNT30174824Lolium perenneVigna angularis54.964279.45399forward
CNT30336663Lolium perenneCynara cardunculus24.3837.983.05177forward
CNT30723923Lolium perenneLupinus angustifolius19.4268.7884.4141forward
CNT3064271Lolium perenneSelaginella moellendorffii37.0548.9179.55269forward

Expression of CNT30134072

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MGSTTSWRSSSNLGLRRWCATFSFLPVKKLSTTITLWPCSSSLSTRWLPTKPAPPVTTTRWGGGRKPAGTREADERAAKEKMGLWSETAEGDREKR*

>peptide 2 (48 aa)
TYRINMPPVSLLLWMLKWITINFTCASQQEPCANPLCQTQHIQCSHDI*

Sequence

>CNT30134072
ACCTATAGGATTAACATGCCCCCAGTAAGTCTCCTTCTGTGGATGCTCAAGTGGATCACCATAAACTTCACTTGTGCTAGTCAACAAGAACCTTGCGCCA
ATCCGCTTTGCCAAACCCAGCATATTCAATGTTCCCATGACATTTGATATGATGGTCTTGATGGGGTTGAACTTGTAGTGCACGGGCGAGGCGGGGCACG
CAAGGTGGTAGATCCGGTCGACCTCGAGAAGGATGGGCTCGACGACGTCGTGGCGGAGCAGCTCGAACCTGGGGTTGCGCAGGTGGTGCGCGACGTTCTC
CTTCCTGCCCGTGAAGAAGTTGTCGACGACGATCACGCTGTGGCCCTGCTCCAGCAGCCTGTCGACGAGGTGGCTGCCCACGAAGCCCGCCCCGCCGGTG
ACGACGACGCGGTGGGGCGGCGGGCGGAAGCCCGCGGGGACGCGGGAGGCGGACGAGCGGGCGGCGAAGGAGAAGATGGGGCTGTGGTCGGAGACGGCGG
AGGGCGACAGGGAGAAGAGGTAGGGGCGGAGGAGGAAGAAGGAGGTGGCGATGAGCGCGCCGAGGAGGACGAAGAGGAGGCGCTGCTCGCGGAGGAGGTA
GCCCACCCAGGTGCGCGGCCCGGGGCGCGCCGGCTTGGAGGCCTTGGACGCCGGCGCGTGCGCCGGCGAGGGCGCGTGGGTGGGGGACTTGTGGAGCTGC
TTCATGGCGGGAGAGCGGCGAGGAGG