Detailed information on CNT30133877


BLAST search results

BLAST vs Swiss-Prot:
sp|P06353|H33_HORVU, E-value = 5e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30495125Lolium perenneOlea europaea20.6614.7790.9144forward
CNT30125320Lolium perennePhyscomitrium patens46.0110.0786.7398forward
CNT30606039Lolium perenneGossypium raimondii59.1526.5884.13126forward
CNT30686633Lolium perenneTriticum urartu41.7832.1398.8889reverse complement
CNT30361473Lolium perenneSorghum bicolor57.2822.6887.7122forward
CNT30596421Lolium perenneOryza meridionalis66.220.0997.87141forward
CNT3058538Lolium perenneAmborella trichopoda34.746.8686.4974forward
CNT30328607Lolium perenneAsparagus officinalis26.299.7987.556forward

Expression of CNT30133877

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKSPTRYASAASWSASTAWLWKRRSVLKSCAISRTRRWK

>peptide 2 (69 aa)
LGALAADAAGELDVLGHDGDALGVDGAEVGVLEEPDEVCLGGLLEREHGVALEAEVRLEVLRDLPHQALE

Sequence

>CNT30133877
GCTTAGGCGCGCTCGCCGCGGATGCGGCGGGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGA
AGAGCCCGACGAGGTATGCCTCGGCGGCCTCCTGGAGCGCGAGCACGGCGTGGCTCTGGAAGCGGAGGTCCGTCTTGAAGTCCTGCGCGATCTCCCGCAC
CAGGCGCTGGAAA