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Detailed information on CNT30133314


BLAST search results

BLAST vs Swiss-Prot:
sp|O65857|GSTF1_ORYSJ, E-value = 2e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674534Lolium perenneSetaria viridis18.7525.7884.4141forward
CNT30595599Lolium perenneOryza meridionalis15.5629.1884.62117forward
CNT30594623Lolium perenneEragrostis curvula8.5123.5389.0664forward

Expression of CNT30133314

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MHTHLITRERSALHSDQALGGTMLALIFLMAGLAMILSHHALTCG*

>peptide 2 (39 aa)
SEALHTCGLGPDIYTTVIQNSHLGLAIDKLRASQNMISV*

Sequence

>CNT30133314
AATCGGAAGCATTGCATACATGTGGTCTAGGACCTGACATATATACTACTGTAATACAAAATTCTCATTTAGGACTTGCAATCGACAAACTGAGAGCATC
ACAAAATATGATTTCAGTTTAAAAGAGTTCCACGGAATACACAACCACCAAACTGCACGCTGGTGCAATTCTAGAGATACAAGCTTATTGCCTGAGTAGT
GATACCAGGAAAAAGGAACATCACATATGCATACACATCTCATAACGCGAGAACGATCTGCCCTGCATTCAGATCAAGCCTTGGGTGGAACCATGCTTGC
GCTGATCTTCTTGATGGCCGGCCTGGCCATGATCCTCTCCCACCACGCCTTGACGTGCGGGTAGGAGTCGAATAGCGCCGCGTGTGGTGTCGCCATGAAG
TAGAAGGTGTAGGGGAAGTGGTTGAGGTCCGCGAAGCTCACGAAATCCCCGGCCAGGTACTCGTGCTGGGACAGACGCGCCTCGTACACCTCCAACACCT
TCTTGAGTTTCTCGAGGCTCTCGGCCACGACCTTCTCGTCCGTGGGGATGCCGCGCATCATCGGGTTGATGAGGCACTGGTACACGATGGGGGACAGGGC
CGGGTTGTAGGTGTGCGCGTCCACCTCCGTCCACACGTCCACCATCGCGGTCTCCTTTAGGTTGCCCTCCCTCAGCAGGTCGACCTCGTCCGTCTTGTAC
TTGCGGAGGACATACTTTGAGATCGCGCGTGACTCTGGGATCATAAAGAATA