Detailed information on CNT30133127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30587177Lolium perenneMusa acuminata3.9421.0486.9669forward

Expression of CNT30133127

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLQFVLVSSRIVSECHLKSFSVNCKWFMHCR*

>peptide 2 (34 aa)
FQAIPMIFLQVVQLLSQACCLPLPELLNLKLQSK*

>peptide 3 (30 aa)
MGAGKCFIVPLFLPKCSDVMFFLFHVTRFS*

>peptide 4 (42 aa)
MLSKDKGTQRTKTTQMGNLVSFFIWYFKSSKFVPRLSKLLTA*

>peptide 5 (41 aa)
MFWLKNLRLSLTYTNCSNEERHSKGSIYAILMGTSLDKHSN*

>peptide 6 (85 aa)
MWSKELMAVATGIVFFVEVFDEAALIFRSGLTDRMMMALSDAWWHVPSEGPVASAVVEASTLHMQGALDEPFWSFLKGPRHVAPL*

>peptide 7 (46 aa)
FSGHTDDFLASCAVVVSSLLPPFARTIEFETTVKIVPHPGLQKVLK*

>peptide 8 (41 aa)
MRSATPRVASMQYLWALHWINTAINSLCGLAQYPCHSAQID*

>peptide 9 (41 aa)
MSHFGLFSKVLGMSPLSSAVEADENAHGRSRRCDGFQCVLF*

Sequence

>CNT30133127
GTTTTCAGGCCATACCGATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAGAACTATTGAATTTGAAACTACAGTC
AAAATAGTGCCACATCCAGGTTTGCAAAAAGTATTGAAATAGACATGACAAACATGGTTGTGCTATCAGTAAGTTACTAGATCATACCCTGTTAAGTTGA
AATACTGAATCACATGGTGTTGCATGCAACTCCTTTCATGGAGTGATTTATACAATAAATGCTAAGCAAGGACAAAGGAACTCAAAGAACAAAAACAACG
CAAATGGGAAACCTTGTCTCTTTTTTCATTTGGTACTTCAAGTCCAGTAAGTTTGTGCCAAGATTGTCTAAGCTCTTGACCGCGTGATGGTTGTCTTCCA
TGATGTCACTCCTAATTCAAACAAATATTCTCCCTAAGTCCTAGAACCAATTATACCTGTTATGTTAGCATGTGAATTCCTAAAGAGATACATGAGCAGG
TCATGAAATCGGTAAATGATCTCGCTGGTAGAACATTTCCCTTGGCAATAGAATGTTGCAGTTTGTCTTAGTTTCAAGCAGAATTGTCAGCGAGTGTCAT
CTCAAAAGTTTCAGTGTGAACTGTAAATGGTTTATGCATTGTAGATAGTTTCAGAGGATGGGTGCAGGCAAATGCTTCATAGTTCCTCTGTTCCTTCCAA
AATGTTCTGATGTTATGTTCTTTCTTTTTCATGTTACGAGGTTCAGTTGAAGGTTAGGAATTGGACAAAAGATGTTATCTGATGTTCTGGTTGAAAAACC
TTCGGCTCAGCTTGACATACACAAACTGTTCTAATGAGGAGCGCCACTCCAAGGGTAGCATCTATGCAATACTTATGGGCACTTCATTGGATAAACACAG
CAATTAACTCATTATGTGGACTTGCGCAATATCCATGCCATTCAGCACAGATTGATTAAGACGGGTGATTTCAAATCAAAGTCTCATCCAGTTGTGCCTT
TCTCTCTCTGTCGAACGGTGACCGGTTAGTGCAATTCAGGTGAACAGTTCAGAGCTGGTCCTGGATGGTGCCACCACAAGGTTACTTGTCCGCGTCCAAA
GTTAACATGAGCCGGACCAAAGAAGCCACTAGTTAGGCTGATATTGTCGGCAAGGTGGGCTGCCTGGTTTCCCAGGTTTGTGGGTGTGAAGCTGCCGGAT
GTGGTCGAAGGAGTTGATGGCGGTGGCTACAGGCATCGTTTTCTTTGTTGAAGTTTTCGATGAAGCAGCCCTCATCTTCCGATCCGGTCTTACAGATCGG
ATGATGATGGCGCTTAGCGATGCTTGGTGGCATGTTCCCTCGGAGGGACCCGTTGCTAGTGCGGTGGTGGAGGCATCAACACTCCACATGCAGGGAGCCT
TAGATGAGCCATTTTGGTCTTTTCTCAAAGGTCCTAGGCATGTCGCCCCTCTCTAGCGCCGTCGAGGCTGACGAAAATGCTCATGGCAGATCACGACGAT
GCGATGGTTTTCAGTGTGTACTTTTTTAGCAAGTGTGACTTGATTGTCTGGCTGTGCGTGTAGTATGTTCTGCCTTACCGGCATCTTCTTTGTTCTCTGG
TGCTTCAGACCTAGTCTAGCTCTGTACCGGTTTCTTCATAATCAATAAATTTAGCAACCCTCTTGCTAACATATAAAATCACGGGAATAGAAGTTCTATG
GTTCAACCTAGTCTTGGTGTGGTCATACCAATTGACACTTAGGTGATTGTGG