Detailed information on CNT30133092


BLAST search results

BLAST vs Swiss-Prot:
sp|P12653|GSTF1_MAIZE, E-value = 9e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299735Lolium perenneTriticum aestivum9.6827.5583.62116forward

Expression of CNT30133092

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MRCYGMFPLPNPKSGGMPAITFFTDGLASSASHQALTCGYTSTTSAYLVAMKYRMKEKWLRSARLTKSPARYRELDSLAS*

>peptide 2 (41 aa)
MAVSSRLPDLRSSGLYLRRMCLAMALDSGKKRYRLLTERII*

>peptide 3 (43 aa)
MNTLSKYHYHMITSRVLFATPQNKFLPVTIYSIMHSDKPELHT*

>peptide 4 (31 aa)
GRKPHGSCTREEVCIRTGILYHIRVHTILHV*

>peptide 5 (39 aa)
MKLSHQLSRTHYVPRNLSIKDHENKHHTTYSFTNESTIW*

>peptide 6 (37 aa)
VGENPTVVVQEKKYVYVLVYYTISVYIPYYMSNRCNN*

>peptide 7 (35 aa)
MFPVTYRLRTMRTNIIRHTVSQMNRPFGDTYYLCP*

>peptide 8 (32 aa)
MLSSTRSWSQTLPTNGPVMTLKTTGRIIGSSW*

Sequence

>CNT30133092
GTGGGAGAAAACCCCACGGTAGTTGTACAAGAGAAGAAGTATGTATACGTACTGGTATACTATACCATATCCGTGTACATACCATATTACATGTCTAACA
GATGTAACAACTAAAGGGTGAATCGGAGTTAACAAAAATAATTGTGGATTAAGACATATTAAGCATAAGCAACAAGTGAAACACACCAATCTCATGATGC
ATGATGAAGCCTAAAACATATGATGACTTATGAAACTGAGTCATCAGTTGAGTCGTACACATTATGTTCCCCGTAACTTATCGATTAAGGACCATGAGAA
CAAACATCATACGACATACAGTTTCACAAATGAATCGACCATTTGGTGATACATATTACCTCTGTCCATAAAAGTATGTTGAAAGATTGTCTAAATTCGG
ATATATCTAAACACTTTTTAGTGTATAGATACATCTAAATTTGAACAAACGTTCAACATCCCCTTATGGACGGGAGAGGGTACAGTTAATGATGTTCAAG
AACAAAAGAAATAACTTATGAATACACTTAGTAAATACCATTATCATATGATTACCTCTAGGGTATTATTTGCAACACCACAAAACAAATTTCTCCCCGT
CACCATTTATTCCATAATGCACTCCGACAAACCAGAGCTGCACACATAAACATCATGCGTTGCTACGGTATGTTCCCACTTCCGAATCCAAAATCCGGAG
GCATGCCGGCCATCACCTTCTTCACGGATGGCCTTGCCAGCAGCGCCTCCCACCAGGCCTTGACGTGCGGGTACACTTCGACCACCTCCGCGTACTTGGT
CGCCATGAAGTACCGCATGAAGGAGAAGTGGCTGAGGTCCGCCAGGCTAACGAAATCCCCCGCCAGATACCGCGAGCTCGACAGCCTAGCTTCATAAACC
TCGAGTGTTTTCTTCAGCTTCTCGATGCTTTCGTCGACGAGATCCTGGTCGCAGACCCTACCTACGAATGGGCCGGTGATGACGTTGAAGACGACAGGCC
GTATTATAGGCTCGAGCTGGTGAGCTTCCACATCGACCCATACGTCCACCATGGCGGTTTCCTCCAGGTTGCCTGATCTTAGAAGCTCGGGTTTGTATTT
GCGGAGAATGTGCCTCGCGATGGCCCTGGATTCTGGAAAAAAAAGATATAGATTGTTAACAGAAAGAATCATTTGATTCATATATAGAACAGCTGCTC